1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaattcatagctttaattcgtctgcaatgccttgtgttggtgccctattttcctttacatggctaagtcttgctttcgtttttgattcttatgttgtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGACCATTTTATGTATCCCCGAAAAGCATCGATCAACTTATCATGAATCTTG
species | Oryza sativa |
transcript | LOC_Os07g45350.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAG GCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGAEST: gi|33683627|gb|CF311866.1|CF311866
genomic: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAGgtaattcata ... gtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGA
EST: AACTGGAACTTCATTGACTGTTGTTGGTGAG GCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGAEST: gi|29680615|gb|CB676890.1|CB676890
genomic: AACTGGAACTTCATTGACTGTTGTTGGTGAGgtaattcata ... gtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGA
EST: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAG GCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGAEST: gi|86905521|gb|CI285484.1|CI285484
genomic: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAGgtaattcata ... gtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGA
EST: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAG GCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGA
genomic: GAACTGAAAGGGTTCTTCCAACTGGAACTTCATTGACTGTTGTTGGTGAGgtaattcata ... gtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGA
tcctttacatggctaagtcttgctttcgtttttgattcttatgttgtatgaatagGCCATTAAAGATGATGTTGGAACTATTCGAATTCAGCGACCACACAAAGGACCATTTTATGTATCCCCGAAAAGCATCGATCAACTTATCATGAATCTTG
ttttgat putative branch site (score: 4)
tttttgattcttat TA-rich tract