1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaatcattcatcttttgcattttgtttcttgttggtctggttaccatacatgtagcttatatattctgctggcatcatttatgttaatagtatgctggctactaaaatttgtcttattcagtactgcacttatatgaaaatttgcattcaatagttcactgatatttctgtctttttatgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATG
species | Oryza sativa |
transcript | LOC_Os05g34650.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGEST: gi|33666778|gb|CF297745.1|CF297745
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGEST: gi|58666538|gb|CK055224.1|CK055224
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGEST: gi|58684548|gb|CK073235.1|CK073235
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGEST: gi|29645586|gb|CB650593.1|CB650593
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGEST: gi|58674742|gb|CK063429.1|CK063429
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
EST: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTG TTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
genomic: TTGGAGATGTCACTGCCAAAGGAGAAAGTGTTGGGAACATTGCTGATCTGgtaatcattc ... atgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTG
tatgaaaatttgcattcaatagttcactgatatttctgtctttttatgtgtgaagTTGGGAACTGGTTTGAGCATTTTAATTTCTAAGAGGAATCCATCATTGGTGACTTCATTTGCCTTCTTGTCTTGTGGCTATCTCCTTAGTTCATACCATG
cactgat putative branch site (score: 39)
tttctgtctttttat CT-rich tract
tctttttat TA-rich tract