1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...tgcaatccctaatgatgttgccaggtgcaactgtctcaacaatcattgtgtcatgcaaaatgtatctcatgtatttactgacggcaacgatttcatccagGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGG
species | Oryza sativa |
transcript | LOC_Os05g28200.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAG GTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTEST: gi|702348|gb|D48639.1|D48639
genomic: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGgtatgccaat ... tttcatccagGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCT
EST: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAG GTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTEST: gi|86907178|gb|CI292792.1|CI292792
genomic: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGgtatgccaat ... tttcatccagGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCT
EST: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAG GTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCT
genomic: TAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGgtatgccaat ... tttcatccagGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCT
ttgtgtcatgcaaaatgtatctcatgtatttactgacggcaacgatttcatccagGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGG
tactgac putative branch site (score: 1)
tttcatcc putative PPT
aaaatgtat TA-rich tract