1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtaagcgaccatacaatttgtgttgcactgctatgtaagattccaagtgctcgggtggcacacagctattgcttcccttctcctgatattatgacttaatatttggagtgttgatagaagatgtttacataaaatatgtttcttgatctgactagagcaatatctacagGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAG
species | Oryza sativa |
transcript | LOC_Os04g52960.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAG GATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTEST: gi|218500712|gb|FG954976.1|FG954976
genomic: CCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAGgtaagcgacc ... atatctacagGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGT
EST: CCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAG GATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGT
genomic: CCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAGgtaagcgacc ... atatctacagGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGT
tagaagatgtttacataaaatatgtttcttgatctgactagagcaatatctacagGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAG
atctgac putative branch site (score: 47)
atgtttacataaaata TA-rich tract