1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gttgctttacgaactacactcactcttgtcaatgttctttcatgtcaaatttacaggacatctttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCACAGCAA
species | Oryza sativa |
transcript | LOC_Os03g25390.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATG GTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCAEST: gi|87015371|gb|CI275561.1|CI275561
genomic: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATGgttgctttac ... tttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCA
EST: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATG GTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCAEST: gi|86594199|gb|CI262427.1|CI262427
genomic: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATGgttgctttac ... tttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCA
EST: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATG GTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCAEST: gi|88827221|gb|CI777786.1|CI777786
genomic: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATGgttgctttac ... tttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCA
EST: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATG GTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCA
genomic: GAAGAGAACAAATGACTCAGACTGATCAAGCTATTGACCGTTCAAAAATGgttgctttac ... tttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCA
actcactcttgtcaatgttctttcatgtcaaatttacaggacatctttcttgtagGTTGTGGCACAAACTATTGAAACTGGAACACAAACTGCTTCAGCGCTATCACAGCAA
cactcac putative branch site (score: 18)
catctttctt putative PPT
tcaaattta TA-rich tract