1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtacgtctgttctatcacaaatacactacatttatcctatattttcttaatctagtgcaaagttcacttacttgaattgatttacttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTTTGACTATCACAGGCAGCATGGCATTG
species | Oryza sativa |
transcript | LOC_Os03g16980.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|702654|gb|D48945.1|D48945
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|325494210|gb|JG458734.1|JG458734
genomic: GTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: AAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|163926814|gb|EG715102.1|EG715102
genomic: AAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAAAAACACTGATGTEST: gi|38478163|gb|CF962296.1|CF962296
genomic: GTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|33675428|gb|CF303667.1|CF303667
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|58602898|gb|CK013426.1|CK013426
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|58669067|gb|CK057753.1|CK057753
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: TGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|29668687|gb|CB664962.1|CB664962
genomic: TGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: TGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|29637730|gb|CB642739.1|CB642739
genomic: TGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|33680606|gb|CF308845.1|CF308845
genomic: GGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|58590735|gb|CF989043.1|CF989043
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|33380802|gb|CF196145.1|CF196145
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|313080404|gb|HO213412.1|HO213412
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATTACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|3763827|gb|AU030579.1|AU030579
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: TGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTEST: gi|58656016|gb|CK044696.1|CK044696
genomic: TGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
EST: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTG GAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
genomic: GCTTGAGCACCCTCAAACAGAGGCCTACTGGGGAAATGTTAACCCAATTGgtacgtctgt ... acttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGT
atattttcttaatctagtgcaaagttcacttacttgaattgatttacttcatcagGAGTCAGGAGTTGCTATGACGAGGGTAAGCGTGTCGCAGAAACACTGATGTTTGACTATCACAGGCAGCATGGCATTG
tttacttc CT-rich tract
aattgattta TA-rich tract