1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtttgctacagttcacatagacgcatgcgcatgtgtttatgctgagcatttgcacttgtatctgtatatgtctgctctgctttctgcctgaaaatattgcaggcattagcatattgatgaactatacctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAG
species | Oryza sativa |
transcript | LOC_Os03g10940.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: CATGACCAGCTTGTCAAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCAEST: gi|87016659|gb|CI275661.1|CI275661
genomic: CATGACCAGCTTGTC-AAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
EST: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCAEST: gi|66923472|gb|CX110320.1|CX110320
genomic: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
EST: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCAEST: gi|25806912|gb|CA762873.1|CA762873
genomic: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
EST: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCAEST: gi|86261473|gb|CI017215.1|CI017215
genomic: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
EST: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCAEST: gi|86425593|gb|CI070690.1|CI070690
genomic: CATTCTTCTATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
EST: TATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAG GTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
genomic: TATGGCCACGATAACCATGACCAGCTTGTCAAAATAGCCAAGgtttgctaca ... acctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCA
tttctgcctgaaaatattgcaggcattagcatattgatgaactatacctgagcagGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAG
tattgat putative branch site (score: 14)
tgaaaatatt TA-rich tract