1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtattttaactgaaagatgtaccctctttcctgctatgaaccttcaactgatatttctcctatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAAGGGAAAATGACATATTATACTTCATAATGGAATACATG
species | Oryza sativa |
transcript | LOC_Os02g47220.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|58662505|gb|CK051191.1|CK051191
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|58660884|gb|CK049564.1|CK049564
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: GAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAGAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATEST: gi|2317408|gb|C22462.1|C22462
genomic: GAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGA-AGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTAT
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|218482677|gb|FG959726.1|FG959726
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTATGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|88839102|gb|CI378026.1|CI378026
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|58664681|gb|CK053367.1|CK053367
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|58670491|gb|CK059177.1|CK059177
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAEST: gi|58665074|gb|CK053760.1|CK053760
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
EST: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAG TCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
genomic: AGAGGAAATATTATTCTTTTGAGGAATGCATGAGTCTACGTGAAGTAAAGgtattttaac ... tatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATA
gatgtaccctctttcctgctatgaaccttcaactgatatttctcctatattgaagTCTTTGCGGCGCATGAATCACCCTAACATCGTGAAGCTCAAGGAGGTTATAAGGGAAAATGACATATTATACTTCATAATGGAATACATG
aactgat putative branch site (score: 3)
tatttctcct CT-rich tract
tatattgaa TA-rich tract