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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatggcctctcacattttgaaggcttagtcctttagtctgtaattgtctgattctaatgtgatgtcttccatcatactattcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAACAATTACCCACAGAATAAACCTGTCTTACCTGTCTAATGAAATTTAGTG

Basic information

species Oryza sativa
transcript LOC_Os02g40890.1
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g40890.2 (Oryza sativa), 3'ss of exon 6
lower sequence: GRMZM2G060870_T02 (Zea mays), 3'ss of exon 6
gtatggcctctcacatt--ttgaaggcttagtcctttagtctgtaattgtctgattctaatgtgatgtcttcca-tcatactattcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCA--TTCCTATGCAACAATTACCCACAGAATAAACCTGTCTTACCTGTCTAATGAAATTTAGTG
|||||| ||||| ||    || | |  | |||  ||| | |  |     |  |   ||  ||  ||  ||      | | |||||||||||||| || ||||| ||||||||| |||||||||| ||  ||    ||| | |     |||||  ||| ||||| | ||||||| |   || | |   |  ||  
gtatggtctctcccaccaattcaggattcagttgttttgccact-----ttcgtgccttgtgaaatagctctaggccctgctattcttgcagGCGAGCGTTGGTCTTGATGATATGAAGGCTTCGTAGAGCGATCTCCAAGGTGGTGATTACA-ACAAAATAAGCGTGTCTTATCAAACTCAAGTGTTGCAGA-

upper sequence: LOC_Os02g40890.2 (Oryza sativa), 3'ss of exon 6
lower sequence: GRMZM2G125556_T01 (Zea mays), 3'ss of exon 6
gtatggcctctcacattttgaaggcttagtcctttagtc-tgtaattgtctgattctaatgtgatgtcttc------catcatactattcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTA-ATGCATTCCTATGCAACAATTACCCACAGAATAAACCTGTCTTACCTGTCTAATGAAATTTAGTG---
|||||| ||||| || ||| |||  | |||  ||| |     |   | |||  ||  |     |  |  |         ||   | |||||||||||| || || || |||||||||||||||||||| || ||  ||  | ||||    |||||  ||| ||||| | ||||||||    || |  |   ||   |   
gtatggtctctcccaattt-aagcttcagttgttttgcaacttgggtatcttgttaaacaacaactttctggtatggtctctcccaattcttgcagGCGAGCGTCGGTCTTGATGATCTGAAGGCTTCATAGATCAATCTCCATGC--TGATTACA-ACAAAATAAGCATGTCTTACGAAACTCA-AAGTGTTGCCGAGG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88476057|gb|CI413328.1|CI413328
EST:     AATTCTG--CTACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88960061|gb|CI381939.1|CI381939
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88504138|gb|CI431644.1|CI431644
EST:     AATTCTG--CTACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88985226|gb|CI006880.1|CI006880
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|86600278|gb|CI356035.1|CI356035
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|89196552|gb|CI400722.1|CI400722
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACGTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCCA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88262804|gb|CI364382.1|CI364382
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|33666455|gb|CF297422.1|CF297422
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88848293|gb|CI086815.1|CI086815
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88273334|gb|CI388790.1|CI388790
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|9865530|gb|AU101280.1|AU101280
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|86432844|gb|CI086455.1|CI086455
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|86880405|gb|CI320946.1|CI320946
EST:     AATTCTGCACGGCCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|66914261|gb|CX101109.1|CX101109
EST:     AAATCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88277826|gb|CI398628.1|CI398628
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88266843|gb|CI368619.1|CI368619
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|89196609|gb|CI400779.1|CI400779
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|396941507|gb|HO188716.1|HO188716
EST:     AATTCTGCACGACCTTTTATCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAAGCTTCTTTATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|87028768|gb|CI349487.1|CI349487
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88693826|gb|CI735329.1|CI735329
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|89196661|gb|CI400831.1|CI400831
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|33662437|gb|CF293404.1|CF293404
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|33657910|gb|CF280524.1|CF280524
EST:     AATTTTGCACGACCTTTTACCCTTTTTTCAAAGAGAATCATGATTTTTTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88446710|gb|CI526543.1|CI526543
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|396941616|gb|HO188273.1|HO188273
EST:     AATTCTGCACGACCTTTTATCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88996969|gb|CI389635.1|CI389635
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCT-                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|86414401|gb|CI068804.1|CI068804
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88280229|gb|CI401427.1|CI401427
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88273110|gb|CI388566.1|CI388566
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88507701|gb|CI435207.1|CI435207
EST:     AATTCTG--CTACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|33807485|gb|CF329620.1|CF329620
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88272910|gb|CI386170.1|CI386170
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88295160|gb|CI525313.1|CI525313
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|86882400|gb|CI325805.1|CI325805
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|157650062|gb|EX449696.1|EX449696
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|58696097|gb|CK084784.1|CK084784
EST:     AATTCTGCACGACCTTTTATCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88508201|gb|CI435707.1|CI435707
EST:     AATTCTG--CTACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88236949|gb|CI236798.1|CI236798
EST:     AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
EST: gi|88491720|gb|CI428992.1|CI428992
EST:     AATTCTG--CTACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTG                         GCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA
genomic: AATTCTGCACGACCTTTTACCCTTTTCTCAAAGAGAATCATGATTTTCTGgtatggcctc ... attcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagtctgtaattgtctgattctaatgtgatgtcttccatcatactattcttgcagGCCAGTGTTGGACTTGATGATCTGAAGGCTTCTTAATGCATTCCTATGCAACAATTACCCACAGAATAAACCTGTCTTACCTGTCTAATGAAATTTAGTG
                  ttctaat  putative branch site (score: 2)
                                           ctattctt  putative PPT
                 attctaat  TA-rich tract