1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatataagacatacatcacctttggattcagttaattgaatggatgtggttagtgattgtggattaatacaattatggtttttggaacagGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGGTTCTTCATAGTAGTTGTTA
species | Oryza sativa |
transcript | LOC_Os02g29510.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACG GTTATCAGTGTAAAGGCAGATGCCCATTGCCTTGAAGCTGTCATTTGEST: gi|29681128|gb|CB677403.1|CB677403
genomic: GGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGgtatataaga ... tttggaacagGTTATCAGTGTAAAGGCAGTTGCC-ATTGCCTTGAAGCTGTCATTTG
EST: GGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACG GTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGA
genomic: GGAAGATGCTTGTTTATATTGCAATCTGTTCAACAATGGGATCTCTCACGgtatataaga ... tttggaacagGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGA
ttgaatggatgtggttagtgattgtggattaatacaattatggtttttggaacagGTTATCAGTGTAAAGGCAGTTGCCATTGCCTTGAAGCTGTCATTTGGTGGATCAAATCAGTTCATCTACATCCAAACATGGTTCTTCATAGTAGTTGTTA
gattaat putative branch site (score: 3)
ttttt putative PPT
attaatacaattatgg TA-rich tract