1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttcctccaactttgtttttggtttattcagtcaacataaccattggctccttctacttttgtgcatatgttatatgagcggaaagagatattacaacaaagataacatacttcctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACACGAAGGCTAAAAATGGCATTGGATGTG
species | Oryza sativa |
transcript | LOC_Os02g12810.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAG AGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACEST: gi|58594152|gb|CF992460.1|CF992460
genomic: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGgttcctccaa ... cctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAAC
EST: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAG AGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCCAATTGATGAAACEST: gi|33793152|gb|CF322457.1|CF322457
genomic: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGgttcctccaa ... cctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAAC
EST: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAG AGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACEST: gi|29639858|gb|CB644867.1|CB644867
genomic: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGgttcctccaa ... cctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAAC
EST: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAG AGGGAGCCTTTACCGCCTATTGCATANGCCAAACEST: gi|112785946|gb|EE591740.1|EE591740
genomic: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGgttcctccaa ... cctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAAC
EST: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAG AGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAAC
genomic: TATGTGACACAACCACCAAATCTTTCGATATTAACTGAATACCTTCCAAGgttcctccaa ... cctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAAC
tgttatatgagcggaaagagatattacaacaaagataacatacttcctttttcagAGGGAGCCTTTACCGCCTATTGCATAGGCCAAACAGTCAAATTGATGAAACACGAAGGCTAAAAATGGCATTGGATGTG
agataac putative branch site (score: 3)
catacttcctttttc CT-rich tract
atattacaa TA-rich tract