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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttaagaggatatgaatctattctttattgaatgaactaagttcatctgtaacattgaaccattgatgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT

Basic information

species Oryza sativa
transcript LOC_Os01g46610.1
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g46610.1 (Oryza sativa), 3'ss of exon 6
lower sequence: GRMZM2G432128_T01 (Zea mays), 3'ss of exon 6
gtatttaagaggatatgaatctattctttattg-aatg---aactaagttcatctgtaacattgaaccattgatgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT
||||||||    || |||| ||| |||  |||   |||   ||  | |||   |    | | ||||    |  ||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||| |||||
gtatttaacgaaatgtgaaactactctgcattttgatgtgcaataatgttttccctctaaactgaaatgcttgtgaaaccagGATGGACTAAGCCCATCTGCATTGGAAGGCATGCCTTCGGTGATCAATACCGAGCTACCGATGCAGTTCTGAAGGGGCCTGGGAAGCTGAAGCTAGTTTT

upper sequence: LOC_Os01g46610.1 (Oryza sativa), 3'ss of exon 6
lower sequence: GRMZM2G033515_T01 (Zea mays), 3'ss of exon 6
gtatttaa-gaggatatgaatctattct---ttattgaatgaactaa--gttcatctgtaacattgaaccattgatgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT
|||||||   |  ||||||| |||  ||   || |||  || | |||  |||   |  ||| ||||||   ||  ||||| |||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||
gtatttagcaaaaatatgaaactaccctgcatttttgtgtgcaataatggtttccccctaa-attgaaatgtttgtgaaatcagGATGGACGAAGCCCATCTGCATTGGAAGGCATGCCTTCGGTGATCAGTACCGAGCTACTGATGCAGTTCTGAAGGGGCCTGGGAAGCTGAAGCTAGTTTT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58662871|gb|CK051557.1|CK051557
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAG
EST: gi|29675350|gb|CB671625.1|CB671625
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58674419|gb|CK063105.1|CK063105
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58678495|gb|CK067182.1|CK067182
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCA
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCA
EST: gi|58695560|gb|CK084247.1|CK084247
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|572311|gb|D41822.1|D41822
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58656887|gb|CK045567.1|CK045567
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGG
EST: gi|58589191|gb|CF987499.1|CF987499
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58607291|gb|CK035324.1|CK035324
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58667102|gb|CK055788.1|CK055788
EST:     GTAATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTG
genomic: GTA-TTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTG
EST: gi|58679016|gb|CK067703.1|CK067703
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58691522|gb|CK080209.1|CK080209
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58587564|gb|CF985872.1|CF985872
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|88385801|gb|CI566663.1|CI566663
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTG-ATTG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTG
EST: gi|58666863|gb|CK055549.1|CK055549
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58681761|gb|CK070448.1|CK070448
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58670722|gb|CK059408.1|CK059408
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58685196|gb|CK073883.1|CK073883
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58662324|gb|CK051004.1|CK051004
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGGATTGGAAGGCAT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCAT
EST: gi|29643695|gb|CB648702.1|CB648702
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58586908|gb|CF985216.1|CF985216
EST:     CAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: CAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|22546869|gb|BU099180.1|BU099180
EST:     ATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: ATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58674328|gb|CK063014.1|CK063014
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTT
EST: gi|58686068|gb|CK074755.1|CK074755
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33794465|gb|CF323117.1|CF323117
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATT
EST: gi|58663486|gb|CK052172.1|CK052172
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGG
EST: gi|58688143|gb|CK076830.1|CK076830
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58657858|gb|CK046538.1|CK046538
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAG
EST: gi|58607758|gb|CK035791.1|CK035791
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29681045|gb|CB677320.1|CB677320
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33796466|gb|CF324100.1|CF324100
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58660728|gb|CK049408.1|CK049408
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33678138|gb|CF306377.1|CF306377
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58656654|gb|CK045334.1|CK045334
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATG
EST: gi|58595435|gb|CK005963.1|CK005963
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58591977|gb|CF990285.1|CF990285
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58601443|gb|CK011971.1|CK011971
EST:     TGTATTCAGAGAGCCCATTATATGCCAAAATGTCCCCAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTG
EST: gi|58684521|gb|CK073208.1|CK073208
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|88368187|gb|CI575069.1|CI575069
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCC-AAGGCTTGTTCCAG                         GATGGACTAAGCCCATTT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTT
EST: gi|58590514|gb|CF988822.1|CF988822
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58668052|gb|CK056738.1|CK056738
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58657351|gb|CK046031.1|CK046031
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33683368|gb|CF311607.1|CF311607
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58607608|gb|CK035641.1|CK035641
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33676653|gb|CF304892.1|CF304892
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33795162|gb|CF323454.1|CF323454
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58662930|gb|CK051616.1|CK051616
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33676462|gb|CF304701.1|CF304701
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58613085|gb|CK040797.1|CK040797
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCT
EST: gi|58678891|gb|CK067578.1|CK067578
EST:     CAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTGGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: CAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58688403|gb|CK077090.1|CK077090
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTG
EST: gi|58690817|gb|CK079504.1|CK079504
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|163918210|gb|EG714014.1|EG714014
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58606037|gb|CK034070.1|CK034070
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCC
EST: gi|58663612|gb|CK052298.1|CK052298
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58670942|gb|CK059628.1|CK059628
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29612963|gb|CB617976.1|CB617976
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58688036|gb|CK076723.1|CK076723
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58656783|gb|CK045463.1|CK045463
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33676140|gb|CF304379.1|CF304379
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|38468398|gb|CF952529.1|CF952529
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58600685|gb|CK011213.1|CK011213
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29612961|gb|CB617974.1|CB617974
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58587829|gb|CF986137.1|CF986137
EST:     ATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: ATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58682904|gb|CK071591.1|CK071591
EST:     AAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: AAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58658151|gb|CK046831.1|CK046831
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29663182|gb|CB659457.1|CB659457
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58611952|gb|CK039664.1|CK039664
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33796234|gb|CF323983.1|CF323983
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33795371|gb|CF323556.1|CF323556
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58658238|gb|CK046918.1|CK046918
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29671744|gb|CB668019.1|CB668019
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58693456|gb|CK082143.1|CK082143
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58662619|gb|CK051305.1|CK051305
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58675276|gb|CK063963.1|CK063963
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58689712|gb|CK078399.1|CK078399
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58662447|gb|CK051133.1|CK051133
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|38473345|gb|CF957477.1|CF957477
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58612758|gb|CK040470.1|CK040470
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCA
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCA
EST: gi|163921089|gb|EG710428.1|EG710428
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATC
EST: gi|58665675|gb|CK054361.1|CK054361
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCT
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCT
EST: gi|33676366|gb|CF304605.1|CF304605
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58654325|gb|CK043005.1|CK043005
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58681694|gb|CK070381.1|CK070381
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58676125|gb|CK064812.1|CK064812
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58592343|gb|CF990651.1|CF990651
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|11442840|gb|BF430739.1|BF430739
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33676128|gb|CF304367.1|CF304367
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29674012|gb|CB670287.1|CB670287
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58676638|gb|CK065325.1|CK065325
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58688940|gb|CK077627.1|CK077627
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58665202|gb|CK053888.1|CK053888
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29635286|gb|CB640295.1|CB640295
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58607745|gb|CK035778.1|CK035778
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|29636156|gb|CB641165.1|CB641165
EST:     TGTATTCACAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58605729|gb|CK033762.1|CK033762
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58665127|gb|CK053813.1|CK053813
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|2309888|gb|C26043.1|C26043
EST:     GCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: GCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58661012|gb|CK049692.1|CK049692
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTG
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTG
EST: gi|117251413|gb|CT844156.1|CT844156
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|33795997|gb|CF323866.1|CF323866
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|58681524|gb|CK070211.1|CK070211
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACC
EST: gi|286473|gb|D15280.1|D15280
EST:     TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAG                         GATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGA
genomic: TGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 69 (upstream exon), 73 (downstream exon)
Score: 211

GCACTGTATTCAGAGAGCCAATTATATGCAAAAATGTCCCAAGGCTTGTTCCAGgtatttaaga ... atgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttctttattgaatgaactaagttcatctgtaacattgaaccattgatgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT
     tattgaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatttaagaggatatgaatctattctttattgaatgaactaagttcatctgtaacattgaaccattgatgaaaccagGATGGACTAAGCCCATTTGCATTGGAAGGCATGCTTTTGGTGATCAGTACCGAGCAACTGATGCAGTTCTGAAGGGGCCTGGCAAGCTCAAGCTGGTTTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG