1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaagcagattcacaacaatccacatgccattatttttcacagttcttatacatcaattagtttgattcaaactcaacaatgataaacttgatgaacaaaaagGGAATCATGGACGAAAGGGAGAGAGATTTGCAGCTCTCCTACGGGCTAGGATACCCTGAACCCAACGTCGTGTTCGCTCTGTGCAGAGGCAGCCGCTCCT
species | Oryza sativa |
transcript | LOC_Os01g05480.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTCTGTCGATCGAGCATCTCATCCTGAGACACTCCCCTGAAGGCAACCAA GGAATCATGGACGAAAGGGAGAGAGATTTGCAGCTCTCCTACGGGCTAGGA
genomic: TTCTGTCGATCGAGCATCTCATCCTGAGACACTCCCCTGAAGGCAAGCAAgtaagcagat ... gaacaaaaagGGAATCATGGACGAAAGGGAGAGAGATTTGCAGCTCTCCTACGGGCTAGGA
atacatcaattagtttgattcaaactcaacaatgataaacttgatgaacaaaaagGGAATCATGGACGAAAGGGAGAGAGATTTGCAGCTCTCCTACGGGCTAGGATACCCTGAACCCAACGTCGTGTTCGCTCTGTGCAGAGGCAGCCGCTCCT
acttgat putative branch site (score: 3)
aattagttt TA-rich tract