1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagtgaagtttgaaatcgttgaatatttcctaccgtgtaaaccaccaagtttagcactcagcttcttatttaattgctatgttcattaacttaactgtttagagcaataaatggttgttgtttagtgatatgaagattaacttttttgtctctgcaatttttcaagTGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAATATAAAACTGAG
species | Oryza sativa |
transcript | LOC_Os12g42730.4 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGCAATGAACCTTTCCCTGAAGGATCTCCCAGTGACTATTTATGAAAAAG TGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAATEST: gi|27577018|gb|CA999712.1|CA999712
genomic: TGCAATGAACCTTTCCCTGAAGGATCTCCCAGTGACTATTTATGAAAAAGgtaagtgaag ... atttttcaagTGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAAT
EST: TGCAATGAACCTTTCCCTGAAGGATCTCCCAGTGACTATTTATGAAAAAG TGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAAT
genomic: TGCAATGAACCTTTCCCTGAAGGATCTCCCAGTGACTATTTATGAAAAAGgtaagtgaag ... atttttcaagTGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAAT
tggttgttgtttagtgatatgaagattaacttttttgtctctgcaatttttcaagTGCACTCTACCAATAGGAGTCCCACTCCGTTAATCTTTGTCCAAGGCAAATATAAAACTGAG
gattaac putative branch site (score: 2)
tttttc putative PPT
aagattaactttttt TA-rich tract