1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaagtacatcattagattatggcaattatgaactaaccaaaagagataaccccatgaagcttaaacattggtgaatttgaatggatggtgggcagGTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGTTACCGCTCATTCCCAATTGCCCTAGTTCGGGAGGTTGCCAAACAACTGT
species | Oryza sativa |
transcript | LOC_Os12g27520.4 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATT GTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGTEST: gi|29668017|gb|CB664292.1|CB664292
genomic: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATTgtaagtacat ... tggtgggcagGTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGT
EST: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATT GTCTGTGAGAAGCTTGGACCA-GCTTATATGATTTTCTGCGGAAAAACAGTEST: gi|29689119|gb|CB685394.1|CB685394
genomic: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATTgtaagtacat ... tggtgggcagGTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGT
EST: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATT GTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGT
genomic: TTGTGTTCAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATTgtaagtacat ... tggtgggcagGTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGT
aagagataaccccatgaagcttaaacattggtgaatttgaatggatggtgggcagGTCTGTGAGAAGCTTGGACCAAGCTTATATGATTTTCTGCGGAAAAACAGTTACCGCTCATTCCCAATTGCCCTAGTTCGGGAGGTTGCCAAACAACTGT
agataac putative branch site (score: 3)
ttaaacatt TA-rich tract