Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG

Basic information

species Oryza sativa
transcript LOC_Os11g06750.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM5G801409_T04 (Zea mays), 3'ss of exon 4
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaact-taaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                   | ||  ||   |   | |  |   | |  ||   |     |||||||| |    |   || |      ||  |   |||||        ||||||||||||||||||||||||||||||||||||||| || || ||| | |||||||| |||||||| ||||||||||| |||||||| || || ||||||
--------------------------------gtactat--ttctgagcttcttgtacatgtactaacttgcacaatctgtttacctttgttgctcttgtttgtaacgaa-ttgctgccatttgcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCATTATGGTATCGTGAAGGGTGACTACCTGATGATCAAGGGCTGCTGTGTGGGTCCAAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G135727_T04 (Zea mays), 3'ss of exon 4
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagc-gaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGAC-ATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                                                |||| ||| |     | |  | | | ||   | ||  |||  |||| | | ||    |   |||   | ||    |   || ||||    |  ||   | || |  | | |   || |||    | | |||                                 
------------------------------------------------------------ccactatggtatcgtgaagggtgactacctgatgatcaagggatgctgtg-tgggtccaaagaagagggtggtgaccctccgccagtccctcctgaagcagACTTCCCGGCTG-GCGCTGGAGGAGATCAAGCTC---------------------------------

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G324314_T05 (Zea mays), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaact-taaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                         |   |  ||||   |     | |  |||      |||||||| |    |   || |    | ||  |   |||||        ||||||||||||||||||||||||||||||||||||||| || || ||| | |||||||| |||||||| ||||||||||| |||||||| || || ||||||
----------------------------------------gtactatttctgagcttgtactaacttgca---caatctgtttacctttgttgctcttgttggtaacgaa-ttgctgccatttgcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCATTATGGTATCGTGAAGGGTGACTACCTGATGATCAAGGGCTGCTGTGTGGGACCAAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G135727_T01 (Zea mays), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                         |   |  ||||   |   | |  ||   |     |||||||| |    |   ||         |     |||||        |||||| |||||||||||||||||||||||||||||||| ||||| ||| | |||||||| |||||||| ||||||||||| |||||||| || || ||||||
----------------------------------------gtactatttctgagcttcttgtactaacttgcacaatctgtttacctttgttgctcttgttggttacgaattgctgccatttgcagGACCGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCACTATGGTATCGTGAAGGGTGACTACCTGATGATCAAGGGATGCTGTGTGGGTCCAAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G132968_T02 (Zea mays), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                         |   |  ||||   |   | |  ||   |     |||||||| |    |   ||         |   | |||||        |||||| |||||||||||||||||||||||||||||||| ||||| ||| | |||||||| |||||||| ||||||||||| |||||||| || || ||||||
----------------------------------------gtactatttctgagcttcttgtactaacttgcacaatctgtttacctttgttgctcttgttggttacggattgctgccatttgcagGACCGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCACTATGGTATCGTGAAGGGTGACTACCTGATGATCAAGGGATGCTGTGTGGGTCCAAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G109677_T04 (Zea mays), 3'ss of exon 6
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaact-taaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                         |   |  ||||   |   | |  ||   |     |||||||| |    |   || |    | ||  |   |||||        ||||||||||||||||||||||||||||||||||||||| || || ||| | |||||||| |||||||| ||||||||||| |||||||| || || ||||||
----------------------------------------gtactatttctgagcttcttgtactaacttgcacaatctgtttacctttgttgctcttgttggtaacgaa-ttgctgccatttgcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCCCATTATGGTATCGTGAAGGGTGACTACCTGATGATCAAGGGCTGCTGTGTGGGTCCAAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GLYMA12G36940.1 (Glycine max), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                     |    ||    | ||| |    |||| |    ||||  ||| | |||   ||   | || | |   ||  || |||||  ||    ||||||||||||||| || ||||| |||||||| |||||||| || || || |||||||  || ||  | ||| | ||||| ||||||||||| || ||||||
-----------------------------------gtacaggtgtttttttgtttctattttggtg-attattatatcagattgt--gcagtatttgatc---atcttgtttgctaatga---cagGACTGAGAAGGATATTACTCCTATGGGTGGGTTCCCTCATTATGGGGTGGTGAAGGATGATTATATTATGGTGAAGGGATGCTGTGTTGGACCGAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GLYMA09G00280.1 (Glycine max), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaac-ttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                          | ||  | ||| || |||||  |||  ||    || | | |  ||| | |   ||  |  || ||||      || |     ||||||||||||||| || ||||| |||||||| |||||||| || ||||| |||||||  || ||  | ||| | ||||| ||||||||||| || ||||||
-----------------------------------------gtacatttgtgttttttgtttc-tattttaggttatttatatcagagtgcagtatttgatcatcttgt-----ttcctaatgacagGACTGAGAAGGATATTACTCCTATGGGTGGGTTCCCTCATTATGGTGTGGTGAAGGATGATTATATTATGGTGAAGGGATGCTGTGTTGGACCGAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GLYMA20G30810.1 (Glycine max), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccat-gattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                             ||   |   | ||||     | |||    |   |        |     | ||||||  ||  ||||| |  |     | | |||| | |     ||||||| ||||| ||||| || || || ||||| ||||||||||| |||||||| ||||  || ||  ||||| ||||||| ||||| ||||| |||||||| 
--------------------------gtaagtgttttgttgattatggttttgtgcaataaatttagcaggaagtattttgtttgtaagtcaaactaaccc----ctctacttgttttctgattcagGACCGAGAAAGACATTACCCCAATAGGTGGTTTCCCTCACTATGGTGTTGTTAAGGATGATTATATCATGGTCAAGGGATGCTGCGTTGGTCCCAAGAAA

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GLYMA10G36780.1 (Glycine max), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgt-ttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                      |||     |  || | |||||     | |||    |   ||  |   |    | |  |  ||  |    ||    ||   |   | | |||| | |      |||||| ||||| ||||| || || |||||||| ||||||||||| |||||||| ||||  || |   ||||| ||||||| ||||||||||| |||||||||
---------------------gttagtgttgt-cttcttgattatggttttgtgcagtaaattattgaacagcaggaagtactttggttgtaagtcaaattaaccctctacttgttttctgatccagGACCGAGAAAGACATTACCCCAATGGGTGGTTTCCCTCACTATGGTGTTGTTAAGGATGATTTTATCATGGTCAAGGGATGCTGTGTTGGTCCCAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: AT1G43170.7 (Arabidopsis thaliana), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgct-cagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                      | |    |    ||  || ||       | ||| |||| || |     ||| | |||||     | |  |   | |  |||| |||  |   | |   | |  ||||||||||||||  | ||||| ||||| |||||||| ||||||||| |||||||||  |||||| | ||||| ||||| ||||||||||| |||||||||
---------------------gtcagtagaaatttctctgtttcgtttcttttctcctgtctggt-catgattacttctgtggtttatctgagtctga-tgataatgttttgtgtatgatgatatagGACTGAGAAGGATGTGACTCCAATGGGAGGCTTCCCACACTACGGTATTGTGAAGGATGACTACTTGATGATTAAGGGGTGCTGTGTTGGTCCCAAGAAG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: Vv07s0031g02050.t01 (Vitis vinifera), 3'ss of exon 2
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttct-gtttgatatgctattgcatctgtttgcgagcgaaacttaaacga-tattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG-------
                             | |  | |||||    || |  |  | || | | | |||    |||| | |  | | |    |   ||   | |  |||||  |   | |||   |||||||||||||||| |||||||| |||||||| || |||||||  ||||| || ||||  || ||  |  |||||||||| ||||||||||| || ||||||       
-----------------------------aaccttgcatga----aacttagcatcctcgctaggtattaatttgctttttctcgtgctttactatttttcaagcattgt-ttcaatgttgta-tcaggactgagAAGGATATCACTCCAATGGGTGGGTTTCCTCACTGTGGTGTGGTTAAGGATGATTATGTTTTGATCAAGGGGTGCTGTGTTGGGCCAAAGAAGAGGGTCG

upper sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 5
lower sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 5
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                   |  | | |  ||| ||  ||| ||| | |       ||  | | | | | |        || |  ||     ||  | |  | |  | | ||||          |||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| |||||||  || ||  | ||||||||||||||||||||||| || ||||||
------------------taagtaataatagccct--atgtttgtatac------tcaatctcacaggatgccaacattgctaccgtaactaatatcattgtttctttacttggataataaaacagGACCGAGAAAGACATAACTCCAATGGGTGGTTTCCCTCACTACGGTGTGGTGAAGGATGATTATGTGATGATCAAGGGTTGCTGTGTTGGGCCTAAGAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88902609|gb|CI088147.1|CI088147
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88993466|gb|CI110287.1|CI110287
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88829596|gb|CI074466.1|CI074466
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86543509|gb|CI183715.1|CI183715
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86250807|gb|CI007670.1|CI007670
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|15852375|gb|BI805171.1|BI805171
EST:     CAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCACTGGGTGGCTTCCCTCACTACGGTGTTG
genomic: CAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCA-TGGGTGGCTTCCCTCACTACGGTGTTG
EST: gi|88841145|gb|CI080599.1|CI080599
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCAGTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89177309|gb|CI250758.1|CI250758
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|27921109|gb|CB096917.1|CB096917
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86544896|gb|CI185102.1|CI185102
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88218750|gb|CI218599.1|CI218599
EST:     GTCTGGCCAGGAAAGCCATGCTGCCGGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTTTTGT
genomic: GTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88840584|gb|CI080038.1|CI080038
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCAATACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88840158|gb|CI079612.1|CI079612
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCAGTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86489815|gb|CI132448.1|CI132448
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|87024268|gb|CI257009.1|CI257009
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|117216971|gb|CT845288.1|CT845288
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88199723|gb|CI199573.1|CI199573
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86545270|gb|CI185476.1|CI185476
EST:     GCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|33809437|gb|CF330598.1|CF330598
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTTCCCATGGGTGGCTTCCCTCACTACGGTGTTG
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCAC-TCCCATGGGTGGCTTCCCTCACTACGGTGTTG
EST: gi|88832738|gb|CI369628.1|CI369628
EST:     GCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88199392|gb|CI199242.1|CI199242
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88218520|gb|CI218369.1|CI218369
EST:     CAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTTTTGT
genomic: CAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86546379|gb|CI186585.1|CI186585
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88840557|gb|CI080011.1|CI080011
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|11025812|gb|AU162413.1|AU162413
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86887338|gb|CI313241.1|CI313241
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86536049|gb|CI176255.1|CI176255
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88466371|gb|CI529780.1|CI529780
EST:     CTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: CTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89174848|gb|CI111046.1|CI111046
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86431294|gb|CI083717.1|CI083717
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86435079|gb|CI106312.1|CI106312
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89198367|gb|CI007427.1|CI007427
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88842622|gb|CI081878.1|CI081878
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88248595|gb|CI248444.1|CI248444
EST:     GCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86868038|gb|CI331830.1|CI331830
EST:     GCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGGTGGCTTCCCTCACTACGGTGTTG
genomic: GCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCAT-GGGTGGCTTCCCTCACTACGGTGTTG
EST: gi|86546631|gb|CI186837.1|CI186837
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|218480729|gb|FG952861.1|FG952861
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88908137|gb|CI090733.1|CI090733
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|33654546|gb|CF277160.1|CF277160
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACCTCCCATGGGTGGCTTCCCTCACTACGGTGTTG
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCA-CTCCCATGGGTGGCTTCCCTCACTACGGTGTTG
EST: gi|88199712|gb|CI199562.1|CI199562
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86435443|gb|CI106676.1|CI106676
EST:     GGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88971544|gb|CI017858.1|CI017858
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86414559|gb|CI068962.1|CI068962
EST:     TGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: TGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|87034349|gb|CI188973.1|CI188973
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88218533|gb|CI218382.1|CI218382
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|38477550|gb|CF961683.1|CF961683
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89168921|gb|CI020461.1|CI020461
EST:     TCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACCAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTG
genomic: TCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGA-CAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTG
EST: gi|86593326|gb|CI257966.1|CI257966
EST:     GCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88997900|gb|CI390393.1|CI390393
EST:     ATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89193650|gb|CI116283.1|CI116283
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88840363|gb|CI079817.1|CI079817
EST:     CCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: CCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88842144|gb|CI081400.1|CI081400
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86488134|gb|CI130767.1|CI130767
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88834082|gb|CI077563.1|CI077563
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89169040|gb|CI020580.1|CI020580
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88272249|gb|CI386703.1|CI386703
EST:     GCACGGAATTTGACAG                         GAGTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89193555|gb|CI050853.1|CI050853
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|58682990|gb|CK071677.1|CK071677
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|8955790|gb|BE229595.1|BE229595
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|3107420|gb|D43160.1|D43160
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGNGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86522927|gb|CI163133.1|CI163133
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88839844|gb|CI017609.1|CI017609
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|89193882|gb|CI018200.1|CI018200
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86594366|gb|CI251238.1|CI251238
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|58677758|gb|CK066445.1|CK066445
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACG
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACG
EST: gi|163928428|gb|EG711340.1|EG711340
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTG
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTG
EST: gi|86486869|gb|CI129502.1|CI129502
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|300215860|gb|HO088486.1|HO088486
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|55411882|gb|CV724258.1|CV724258
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATTTTTTCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88850334|gb|CI091827.1|CI091827
EST:     GGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88530198|gb|CI458575.1|CI458575
EST:     CACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: CACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|10930733|gb|AU161007.1|AU161007
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGGTGTTG
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTAC-GGTGTTG
EST: gi|88248188|gb|CI248037.1|CI248037
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTGCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88964539|gb|CI069887.1|CI069887
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|13164981|gb|AU173778.1|AU173778
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|29689627|gb|CB685902.1|CB685902
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86430813|gb|CI083236.1|CI083236
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86871681|gb|CI331058.1|CI331058
EST:     GCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88538105|gb|CI467104.1|CI467104
EST:     GCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88445168|gb|CI552221.1|CI552221
EST:     GAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86427575|gb|CI072672.1|CI072672
EST:     CCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCATTACGGTGTTGT
genomic: CCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88532478|gb|CI461967.1|CI461967
EST:     CCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: CCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88984423|gb|CI014977.1|CI014977
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|66920700|gb|CX107548.1|CX107548
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86430487|gb|CI082910.1|CI082910
EST:     TGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: TGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|163921186|gb|EG710451.1|EG710451
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86822748|gb|CI251822.1|CI251822
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88246678|gb|CI246527.1|CI246527
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTATGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88284056|gb|CI405502.1|CI405502
EST:     ACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86420598|gb|CI056587.1|CI056587
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88975186|gb|CI023437.1|CI023437
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86419424|gb|CI054225.1|CI054225
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86434865|gb|CI106098.1|CI106098
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88466087|gb|CI519960.1|CI519960
EST:     GAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88978130|gb|CI384612.1|CI384612
EST:     GCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86491042|gb|CI133675.1|CI133675
EST:     GCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: GCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86877801|gb|CI314174.1|CI314174
EST:     ATCGGCAAGTCTGGCCAGGAAAGCCATACTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: ATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|86593297|gb|CI257937.1|CI257937
EST:     AAGTCTGTCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: AAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
EST: gi|88971656|gb|CI388900.1|CI388900
EST:     TGCTGCCTGCACTGAATTTGACAG                         GACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT
genomic: TGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 74 (downstream exon)
Score: 97

GTCAGAATGGGTACCACCACCGCACTGAGATGAATAAGAAGGTTTACAAGATCGGCAAGTCTGGCCAGGAAAGCCATGCTGCCTGCACTGAATTTGACAGgtaccaattc ... ttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG
                                      cttgctctt  CT-rich tract
                   aaacttaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaccaattcgtctaccagatattacaccagcactccatgattgcaaatctgtcttctgtttgatatgctattgcatctgtttgcgagcgaaacttaaacgatattgtgcttgctcttgcgctcagGACTGAGAAGGACATCACTCCCATGGGTGGCTTCCCTCACTACGGTGTTGTGAAGGGCGACTACCTCATGATCAAGGGTTGCTGTGTTGGCCCCAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG