1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaagtgcacctatgtcaaagaatggtctatgtctgtgatgtactctgggatccgctatcaaataattttgatggagccccttcctgatattaagaaagttcttttgatatcaactgatcattataattaaaatgtgacattttacttatttacagGAAGTGGCTGTAAAGAAGTTTTTGGATCAAGAGTTCTATGGTGATGCTTTGGCTGAATTTCGTTGCGAG
species | Oryza sativa |
transcript | LOC_Os10g29540.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTTCGTATGGAGAAGTATACCATGGCCGATTGGGAATGGAACT GAAGTGGGCTGTAAAGAAGTTTTTGGGATCAAGAGTTCTATGGTGATGCTT
genomic: GTTCGTATGGAGAAGTATACCATG-CCGATTGG-AATGGAACTgtaagtgcac ... ttatttacagGAAGTGG-CTGTAAAGAAGTTTTTGG-ATCAAGAGTTCTATGGTGATGCTT
cttttgatatcaactgatcattataattaaaatgtgacattttacttatttacagGAAGTGGCTGTAAAGAAGTTTTTGGATCAAGAGTTCTATGGTGATGCTTTGGCTGAATTTCGTTGCGAG
aactgat putative branch site (score: 26)
ttttactt putative PPT
atcattataattaaaa TA-rich tract