Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagttctgttctcaacttcatggcatcagtagtttacatttctgatgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA

Basic information

species Oryza sativa
transcript LOC_Os08g44380.2
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g44380.2 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G144387_T03 (Zea mays), 3'ss of exon 5
gtgagttctgttctcaacttcatggcatcagtagtttacatttctgatgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGG----GCGGTTGAA
||||||   |  |||  |||||    |  |   | ||   ||     ||||||||| |||||||  ||  | | ||||         |    ||    | |   |||| || | || | |||||| |||||||||| ||||| ||| |||| ||||| |||||||| || ||||||||||||||||    | |||||     |||||      || | ||||    | ||||  |
gtgagtgacg--ctcgccttcaccttaataaccgcttctgtt----gtgtttacatctaatgaacatttcagaatgtacatatgctgaa-ggacttggtta---taacatgctgtgctgtgtgctgtgcagGTGAGATGCCTCTACGTCAAGAGCACCATGGGGAAGCCATACAGGGTGTTCTAAG----TATGCTCTTTTGTGAAGTCTGCTAGGTTCTGGCACCGAGGTTTTA

upper sequence: LOC_Os08g44380.2 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G170561_T01 (Zea mays), 3'ss of exon 6
gtgagttctgttctcaacttcatggcatcagtagttta-----catttctg--atgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAG-CTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA
||||||  |    |   ||| || |||||  |   |||     | || |||   ||||||||| |||||||  || || | |||||| | ||  ||         |   | ||||  ||| || | | ||  |||||||| || ||||| |||||||| ||||| ||||||||||| | |||||||||||||| ||| |||  |    | |         | |||  | ||   |||| 
gtgagtgatccattggtctttattgcatctatgccttaagaatcgttcctgttgtgtttacatctaatgaacattttagaatgtaagtcgaaggagt--------tggttataacacgttgtgatgtatgtgttgcagGTAAGATGCCTCTACATCAAGAGCACCATGGGGAAACCATGCAGGGTGTTCTAAGTCTGCTTTTTTGTGAAGTCTGCTCTTCATGATATTTGGTTTTTGA-

upper sequence: LOC_Os08g44380.2 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM5G862017_T01 (Zea mays), 3'ss of exon 11
gtgagttctgttctcaacttcatggcatcagtagtttacatttctgatgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA
                     ||| | | || |  ||     | |  ||||||||| |||||||  || || | |||||| | ||  ||         |   | ||||  ||| || | | ||| |||||||| || ||||| |||||||| ||||| ||||||||||| | |||||||||||||                                              
---------------------atgccttaagaa--ttgttcctgttgtgtttacatctaatgaacattttagaatgtaagtcgaaggagt--------tggttataacacgttgtgatgtatgcgttgcagGTAAGATGCCTCTACATCAAGAGCACCATGGGGAAACCATGCAGGGTGTTCTAA----------------------------------------------

upper sequence: LOC_Os08g44380.2 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G074769_T01 (Zea mays), 3'ss of exon 4
gtgagttctgttctcaacttcatggcatcagtagttta-----catttctg--atgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAG-CTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA
||||||  |  |||   ||| || |||||  |   |||       || |||   ||||||||| |||||||  || || | |||||| | ||  ||         |   | ||||  |||  | | | ||| |||||||| || ||||| |||||||| ||||| ||||| ||||| | |||||||||||||| ||| |||  |    | |         | |||  | ||   |||||
gtgagtgatcctctggtctttattgcatctatgccttaagaattgttcctgttgtgtttacatctaatgaacattttagaatgtaagtcgaaggagt--------tggttataacacgttgcgatgtatgcgttgcagGTAAGATGCCTCTACATCAAGAGCACCATGGG-AAACCATGCAGGGTGTTCTAAGTCTGCTTTTTTGTGAAGTCTGCTCTTCATGATATTTGGTTTTTGAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88569321|gb|CI502241.1|CI502241
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33682767|gb|CF311006.1|CF311006
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86526954|gb|CI167160.1|CI167160
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88303585|gb|CI508191.1|CI508191
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89171004|gb|CI040281.1|CI040281
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89170916|gb|CI040193.1|CI040193
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88292922|gb|CI507700.1|CI507700
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86527437|gb|CI167643.1|CI167643
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88449518|gb|CI538875.1|CI538875
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33655136|gb|CF277750.1|CF277750
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88470155|gb|CI407426.1|CI407426
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88318616|gb|CI506020.1|CI506020
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88373711|gb|CI506138.1|CI506138
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88278814|gb|CI397618.1|CI397618
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88435675|gb|CI506775.1|CI506775
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88420111|gb|CI513718.1|CI513718
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33664771|gb|CF295738.1|CF295738
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88567056|gb|CI497773.1|CI497773
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88566125|gb|CI496842.1|CI496842
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89168705|gb|CI038557.1|CI038557
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACCATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86525434|gb|CI165640.1|CI165640
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88464007|gb|CI509491.1|CI509491
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88561170|gb|CI491887.1|CI491887
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|9865787|gb|AU101537.1|AU101537
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88977440|gb|CI025176.1|CI025176
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88366301|gb|CI551133.1|CI551133
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACACCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88457353|gb|CI534351.1|CI534351
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33381098|gb|CF196441.1|CF196441
EST:     TTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: TTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88434972|gb|CI504314.1|CI504314
EST:     AAATGAGCTTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88562819|gb|CI493536.1|CI493536
EST:     AAATGGGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88295477|gb|CI527840.1|CI527840
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89171265|gb|CI109789.1|CI109789
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACTATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86252708|gb|CI010190.1|CI010190
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88565910|gb|CI496627.1|CI496627
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88436829|gb|CI521580.1|CI521580
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCCANAAAAGNCACAATGGGGAAACCGTACAGGGT
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACAT-C--AAAAG-CACAATGGGGAAACCGTACAGGGT
EST: gi|55828000|gb|AU065281.2|AU065281
EST:     AAATGAGAGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33799761|gb|CF325746.1|CF325746
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88562432|gb|CI493149.1|CI493149
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|10931177|gb|AU161451.1|AU161451
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33689536|gb|CF317775.1|CF317775
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88318664|gb|CI508260.1|CI508260
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88303888|gb|CI512962.1|CI512962
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|87042110|gb|CI194734.1|CI194734
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88468466|gb|CI514948.1|CI514948
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89179996|gb|CI044275.1|CI044275
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88435042|gb|CI504384.1|CI504384
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86250510|gb|CI003628.1|CI003628
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33694098|gb|CF322337.1|CF322337
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTT
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86539769|gb|CI179975.1|CI179975
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88663334|gb|CI480883.1|CI480883
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88418157|gb|CI501682.1|CI501682
EST:     CAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88565806|gb|CI496523.1|CI496523
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88565550|gb|CI496267.1|CI496267
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88563470|gb|CI494187.1|CI494187
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88562157|gb|CI492874.1|CI492874
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAG-TGCCCTGTACATCAAAAGCACAATGGGGAAACCCGTACAGGGTGT
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCC-TGTACATCAAAAGCACAATGGGGAAACC-GTACAGGGTGT
EST: gi|3762614|gb|AU029366.1|AU029366
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88984771|gb|CI009539.1|CI009539
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33657181|gb|CF279795.1|CF279795
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33655759|gb|CF278373.1|CF278373
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88276941|gb|CI397595.1|CI397595
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88419020|gb|CI508973.1|CI508973
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88491423|gb|CI428695.1|CI428695
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|86903318|gb|CI313681.1|CI313681
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88318946|gb|CI510741.1|CI510741
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88276763|gb|CI397565.1|CI397565
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88447315|gb|CI533956.1|CI533956
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33671595|gb|CF299834.1|CF299834
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88274097|gb|CI394503.1|CI394503
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88461767|gb|CI506843.1|CI506843
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|55433274|gb|CV729689.1|CV729689
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88295186|gb|CI525339.1|CI525339
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88565891|gb|CI496608.1|CI496608
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|89196851|gb|CI402605.1|CI402605
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88565892|gb|CI496609.1|CI496609
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33662472|gb|CF293439.1|CF293439
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTT
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88287974|gb|CI512651.1|CI512651
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33689687|gb|CF317926.1|CF317926
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88378284|gb|CI503850.1|CI503850
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88464826|gb|CI512131.1|CI512131
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88268751|gb|CI378686.1|CI378686
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTT
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88564626|gb|CI495343.1|CI495343
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88563833|gb|CI494550.1|CI494550
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88988618|gb|CI039037.1|CI039037
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88457498|gb|CI536896.1|CI536896
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88562348|gb|CI493065.1|CI493065
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88906172|gb|CI375244.1|CI375244
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|33682461|gb|CF310700.1|CF310700
EST:     ACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: ACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88318845|gb|CI510640.1|CI510640
EST:     AAATGAGCGTCAACTTCCTCGTNTCCCTTTTGAAGAAGAACTGGCAGAAT                         NTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88303475|gb|CI508081.1|CI508081
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88454645|gb|CI509418.1|CI509418
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88319116|gb|CI513180.1|CI513180
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
EST: gi|88567972|gb|CI498689.1|CI498689
EST:     AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAAT                         GTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC
genomic: AAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 74 (downstream exon)
Score: 163

TGCTGTGGGTAACTTGTCGATGGAGGAGAAGCAGATCCAGCAAAACATCCAAATGAGCGTCAACTTCCTCGTGTCCCTTTTGAAGAAGAACTGGCAGAATgtgagttctg ... tgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA
                         gtctaac  putative branch site (score: 163)
                                ttgttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagttctgttctcaacttcatggcatcagtagtttacatttctgatgtttacatgtaatgaaatttatatagtgtaagcccaacaagcaaacacaatcagtctaacttgttatggtttgtgctttgcagGTGAGGTGCCTGTACATCAAAAGCACAATGGGGAAACCGTACAGGGTGTTCTAAGCTGGTTTGCTCCACATTGAAGCTGATAAGATGCTGGGCGGTTGAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
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