1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...cctgacttattcctccaatgccatatttatcctaaacatttttttttggttgtagctgacgttttcttttctttacttacttttttaatttctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAAGGGATCCAGATGAAGAATGTCTCTGCCAAACCAGTAGCAAGCACTGAG
species | Oryza sativa |
transcript | LOC_Os08g08840.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88505541|gb|CI433047.1|CI433047
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88260261|gb|CI362554.1|CI362554
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88831430|gb|CI083824.1|CI083824
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAATGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86832721|gb|CI345136.1|CI345136
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTT-GCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88266166|gb|CI377068.1|CI377068
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88481234|gb|CI418505.1|CI418505
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88474434|gb|CI411705.1|CI411705
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88838346|gb|CI373706.1|CI373706
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88275658|gb|CI396262.1|CI396262
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: GCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAGGAEST: gi|89182224|gb|CI113593.1|CI113593
genomic: GCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCGAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88322445|gb|CI540413.1|CI540413
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: CCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|89183228|gb|CI045793.1|CI045793
genomic: CCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88491139|gb|CI428411.1|CI428411
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88297904|gb|CI555919.1|CI555919
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88844498|gb|CI020345.1|CI020345
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88254287|gb|CI352913.1|CI352913
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86435296|gb|CI106529.1|CI106529
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88323939|gb|CI561348.1|CI561348
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: CTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88845221|gb|CI084146.1|CI084146
genomic: CTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88507217|gb|CI434723.1|CI434723
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|89167940|gb|CI109144.1|CI109144
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86253198|gb|CI058123.1|CI058123
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86433436|gb|CI093779.1|CI093779
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88468056|gb|CI517515.1|CI517515
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88971658|gb|CI388902.1|CI388902
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTCCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88516368|gb|CI444022.1|CI444022
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|58590139|gb|CF988447.1|CF988447
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTEST: gi|89195678|gb|CI393707.1|CI393707
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTT
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88847174|gb|CI001446.1|CI001446
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88219844|gb|CI219404.1|CI219404
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|87024623|gb|CI259338.1|CI259338
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAACCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86837175|gb|CI347669.1|CI347669
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88298012|gb|CI556027.1|CI556027
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88529854|gb|CI458209.1|CI458209
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88274170|gb|CI394576.1|CI394576
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GC-AAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86500797|gb|CI143430.1|CI143430
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|218494424|gb|FG970087.1|FG970087
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88374854|gb|CI520920.1|CI520920
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCAGTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|218497737|gb|FG963955.1|FG963955
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88282917|gb|CI402117.1|CI402117
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|89169288|gb|CI038297.1|CI038297
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88266988|gb|CI378923.1|CI378923
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88275975|gb|CI396579.1|CI396579
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTTTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88450190|gb|CI541951.1|CI541951
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: AGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88840622|gb|CI080076.1|CI080076
genomic: AGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86430388|gb|CI082811.1|CI082811
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88842335|gb|CI081591.1|CI081591
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86435464|gb|CI106697.1|CI106697
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88476478|gb|CI413749.1|CI413749
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|58670578|gb|CK059264.1|CK059264
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88434843|gb|CI549040.1|CI549040
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88253065|gb|CI351691.1|CI351691
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|89168008|gb|CI109212.1|CI109212
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88429365|gb|CI557097.1|CI557097
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: GCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|89181479|gb|CI112985.1|CI112985
genomic: GCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88296801|gb|CI540153.1|CI540153
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88273116|gb|CI388572.1|CI388572
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTT-GCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88274610|gb|CI395016.1|CI395016
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88837113|gb|CI078473.1|CI078473
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88958861|gb|CI381664.1|CI381664
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATTCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|88297885|gb|CI555900.1|CI555900
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAEST: gi|86493864|gb|CI136497.1|CI136497
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
EST: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAG GCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
genomic: ATGCACTAGGAGCTGCCATTGCCATCCTTGGCACATTCCTGTATTCTCAGgtaaattctt ... tctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGA
ttggttgtagctgacgttttcttttctttacttacttttttaatttctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAAGGGATCCAGATGAAGAATGTCTCTGCCAAACCAGTAGCAAGCACTGAG
ttttcttttctttact CT-rich tract
ttttcttttctttact TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cctgacttattcctccaatgccatatttatcctaaacatttttttttggttgtagctgacgttttcttttctttacttacttttttaatttctgtttcagGCAAAGCAGTGAGTTCAAAAAGATGGTAATGTTCAGGGCCATGGATGAAGAAGGGATCCAGATGAAGAATGTCTCTGCCAAACCAGTAGCAAGCACTGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
cctgact
- - - - - - - -caatgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - gctgacg