1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtgagtgtgtttccctatattttctgcatattaacgatacaacacgttttcctgctctgctttctgtactctaattttgttttccttccttcagCATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGACG
species | Oryza sativa |
transcript | LOC_Os07g49270.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAA CATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGACEST: gi|58609363|gb|CK037396.1|CK037396
genomic: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAAgtgagtgtgt ... cttccttcagCATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGAC
EST: CAAAACCTAATCCTAACCCTTTTTATTACGAGCAGCAGACTAAAACTGAA CATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGACEST: gi|33678240|gb|CF306479.1|CF306479
genomic: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAAgtgagtgtgt ... cttccttcagCATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGAC
EST: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAA CATCATTTTGAAATGEST: gi|33679186|gb|CF307425.1|CF307425
genomic: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAAgtgagtgtgt ... cttccttcagCATCATTTTGAAATG
EST: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAA CATCATTTTGAAATG
genomic: CAAAACCTAATCCTAACCCTTTCTATTACGAGCAGCAGACTAAAACTGAAgtgagtgtgt ... cttccttcagCATCATTTTGAAATG
caacacgttttcctgctctgctttctgtactctaattttgttttccttccttcagCATCATTTTGAAATGGTTGATGGTGTTATTCATGTATACCCCAATAAAGACG
ctctaat putative branch site (score: 43)
ctctaattttgttttc CT-rich tract
tctaattttgtttt TA-rich tract