1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
...atggaggtagtacataactccagtcaatgattccataatccatatagcactctgttaattgtcttatttcttaagttttgccataatttctttattccagACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGACCGAG
species | Oryza sativa |
transcript | LOC_Os07g22720.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGGACAGATAGCTTCAGCAACATCTTTCTCAAGCAGTGCAG ACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGAEST: gi|58665439|gb|CK054125.1|CK054125
genomic: TGGACAGATAGCTTCAGCAAGATCTTTCTCAAGCAGTGCAGgtactttact ... tttattccagACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGA
EST: GTCATGTGGACAGATAGCTTCAGCAAGATCTTTCTCAAGCAGTGCAG ACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGAEST: gi|29636053|gb|CB641062.1|CB641062
genomic: GTCATGTGGACAGATAGCTTCAGCAAGATCTTTCTCAAGCAGTGCAGgtactttact ... tttattccagACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGA
EST: TGGACAGATAGCTTCAGCAAGATCTTTCTCAAGCAGTGCAG ACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGA
genomic: TGGACAGATAGCTTCAGCAAGATCTTTCTCAAGCAGTGCAGgtactttact ... tttattccagACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGA
agcactctgttaattgtcttatttcttaagttttgccataatttctttattccagACCTGCCACCACATCAGGAAATAGGGATGCCATCACTCTCTCCTACAATGACCGAG
tgttaat putative branch site (score: 3)
tttctttattcc putative PPT
ttatttcttaagtttt TA-rich tract