Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtgtaacttggtccacttgaactccttgcgctgttaccttgtgagcatggttttgtcccgctacattaggagactatttgctgatttggaatgcgatgaaatatgtattatagatgtggtaccctggaaagtacaatgaccacatgcatttgacacaatgttttctgcctctcttttttgttggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGGTCATTTGACCCTGCCAG

Basic information

species Oryza sativa
transcript LOC_Os06g51150.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os06g51150.1 (Oryza sativa), 3'ss of exon 5
lower sequence: PP1S422_8V6.3 (Physcomitrella patens), 3'ss of exon 6
gtgtgtaacttggtccacttgaactcct---tgcgctgttaccttgtgagcatggttttgtcccgctacattaggagactatttgctg-atttggaatgcgatgaaa---tatgtatt-atagatgtggtaccctggaaagtacaatgaccacatgcatttgacacaatgttttctgcctctcttttttgttggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGGTCATTTGACCCTGCCAG--------------------------------
||   |  | ||  |  ||   |    |   |     | ||      ||        |   |  |    |||  |    |||||  |  || |||| || |   ||    |  || || |||||| || || | ||  ||   |||  |    | |   |||| | |   ||  ||| |||     | | |       ||||   || |||  |||||| ||||| |||||||| ||||| ||||| | |||||| |||||||||||  |                                
gtaattttcctgcccatctcttatcgttaaatatataggtataccaagaaagaaaactgagcgtgaataatttaggtgttatttaatacatatggactgagcacaatctttgcgtgttgatagat-tgatagcttgagaaactcaagaattttaagtgattgata-acaattcactgactcaacaatgtatgattgtggcagGCCGTTATTCCCAAGGAAAACAACTTCCAACAAGCTGGAGAGAGGTTCCGGTCCTTTGACCCTGCTCGTCAAGACCGATTTATTAAGCGTATTGTTGAGC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29672408|gb|CB668683.1|CB668683
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89177381|gb|CI250830.1|CI250830
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|33681772|gb|CF310011.1|CF310011
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29665792|gb|CB662067.1|CB662067
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89175797|gb|CI042818.1|CI042818
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGGACGATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88271902|gb|CI387955.1|CI387955
EST:     TTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: TTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|117240442|gb|CT842802.1|CT842802
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88833920|gb|CI077401.1|CI077401
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|10611400|gb|AU108276.1|AU108276
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29628365|gb|CB633376.1|CB633376
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|10794622|gb|AU108588.1|AU108588
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|218483311|gb|FG958111.1|FG958111
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|3767173|gb|AU031283.1|AU031283
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGNAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88220969|gb|CI220925.1|CI220925
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88845506|gb|CI084431.1|CI084431
EST:     AGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: AGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|33654003|gb|CF276617.1|CF276617
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTTTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86434988|gb|CI106221.1|CI106221
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86428534|gb|CI075215.1|CI075215
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88907472|gb|CI090266.1|CI090266
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88842492|gb|CI081748.1|CI081748
EST:     GAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: GAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88903555|gb|CI089093.1|CI089093
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGGCAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29623122|gb|CB628133.1|CB628133
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|218479422|gb|FG947994.1|FG947994
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86414445|gb|CI068848.1|CI068848
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86260559|gb|CI066432.1|CI066432
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|55409445|gb|CV721821.1|CV721821
EST:     GAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: GAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29616048|gb|CB621060.1|CB621060
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89186644|gb|CI114353.1|CI114353
EST:     GCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: GCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|218497886|gb|FG958707.1|FG958707
EST:     GTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: GTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88998153|gb|CI038038.1|CI038038
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88247337|gb|CI247186.1|CI247186
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAAAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|87026903|gb|CI259556.1|CI259556
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88907379|gb|CI090173.1|CI090173
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGGCAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88848302|gb|CI086824.1|CI086824
EST:     GAAGGTCCCTATTCCTCCTCGTGTTCAAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: GAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|11565234|gb|AU165870.1|AU165870
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGGTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGNCAAGGGGACCAATTTCCAACAGGCTGGTGAGAG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAG
EST: gi|89180154|gb|CI044433.1|CI044433
EST:     ATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: ATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88845333|gb|CI084258.1|CI084258
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86430551|gb|CI082974.1|CI082974
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86430982|gb|CI083405.1|CI083405
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89175727|gb|CI042748.1|CI042748
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86539997|gb|CI180203.1|CI180203
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88842566|gb|CI081822.1|CI081822
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|3766614|gb|AU030724.1|AU030724
EST:     CTNAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTNTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTNCCAACAGGCTGNTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88845124|gb|CI084049.1|CI084049
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|10794772|gb|AU108738.1|AU108738
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTNTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGTTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89168139|gb|CI109343.1|CI109343
EST:     TCTAACAGCCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: TCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88964875|gb|CI084873.1|CI084873
EST:     CTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGGTACCGG
genomic: CTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|87029598|gb|CI257393.1|CI257393
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88510336|gb|CI437842.1|CI437842
EST:     GTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: GTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88964912|gb|CI084910.1|CI084910
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGGTACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|89181008|gb|CI045091.1|CI045091
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|218486592|gb|FG953936.1|FG953936
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86490025|gb|CI132658.1|CI132658
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86842805|gb|CI342092.1|CI342092
EST:     TAACAGGC-GTC-GGAAAAA                         TGTGTCA-TGACAAGGAGAAC-A-TTCCAACA-GCTGGTGAGAGATACCGG
genomic: TAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88964755|gb|CI084753.1|CI084753
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86488117|gb|CI130750.1|CI130750
EST:     TGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: TGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88981900|gb|CI027478.1|CI027478
EST:     CGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86889804|gb|CI333455.1|CI333455
EST:     AAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: AAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|10611388|gb|AU108270.1|AU108270
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|30227763|gb|CB965655.1|CB965655
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|58667476|gb|CK056162.1|CK056162
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGACCAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88841634|gb|CI080890.1|CI080890
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACGGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88842186|gb|CI081442.1|CI081442
EST:     TCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCA-GGACCAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCG
genomic: TCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGA-CAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCG
EST: gi|86518050|gb|CI158256.1|CI158256
EST:     CCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|218500582|gb|FG955406.1|FG955406
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|5803507|gb|AI978477.1|AI978477
EST:     CTGAGANNGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88848929|gb|CI087451.1|CI087451
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86593938|gb|CI260167.1|CI260167
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29662727|gb|CB659002.1|CB659002
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|30227433|gb|CB965325.1|CB965325
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACTATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88907598|gb|CI090392.1|CI090392
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88842308|gb|CI081564.1|CI081564
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86497782|gb|CI140415.1|CI140415
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86429751|gb|CI082174.1|CI082174
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|86428820|gb|CI075501.1|CI075501
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88845332|gb|CI084257.1|CI084257
EST:     AGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: AGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|11564613|gb|AU165249.1|AU165249
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|55411905|gb|CV724281.1|CV724281
EST:     TTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: TTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88249998|gb|CI249847.1|CI249847
EST:     CCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|14981765|gb|BI306443.1|BI306443
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|88845217|gb|CI084142.1|CI084142
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG
EST: gi|29619348|gb|CB624360.1|CB624360
EST:     CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAG                         TGTGTCATTGACAAGGAGAACAATTTCAAACAGGCTGGTGAGAGATACCGG
genomic: CTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 70 (downstream exon)
Score: 102

GTTAACTACTTCCCTTCAAGGTTTGATGCTGCACGTCATGCTGAGAAGGTCCCTATTCCTCCTCGTGTTCTAACAGGCTGTCGGGAAAAGgtgtgtaact ... ggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGGTCATTTGACCCTGCCAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaccacatgcatttgacacaatgttttctgcctctcttttttgttggaaatgcagTGTGTCATTGACAAGGAGAACAATTTCCAACAGGCTGGTGAGAGATACCGGTCATTTGACCCTGCCAG
          atttgac  putative branch site (score: 102)
                       ttttctgcctctcttt  putative PPT
                                    ttttttgtt  TA-rich tract