1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaactgtccaccatgcataaatcataatgctggacttttagatcttcgcgttcctattgaagcaatgttctctattatttgcactagggattccaagtggtaatctaacattataactttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCATGAGTCTATCTATTGTCAG
species | Oryza sativa |
transcript | LOC_Os06g06820.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AAAAAAGACTATAAGTTATTACTTCCTGAAAGAG TTTGAGAGGTGGTTAGCTTTTGATCAAAATCCTCTTTATGCTCTCTTGCATEST: gi|86858904|gb|CI275118.1|CI275118
genomic: AAAAAAGACTATAAGTTATTACTTCCTGAAAGAGgtaaactgtc ... ctttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCAT
EST: AGTTATTACTTCCTGAAAGAG TTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCATEST: gi|87029615|gb|CI257410.1|CI257410
genomic: AGTTATTACTTCCTGAAAGAGgtaaactgtc ... ctttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCAT
EST: TATTAGTCCCTGGCGCAAAAAAGACTATAAGTTATTACTTCCTGAAAGAG TTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCATEST: gi|112786319|gb|EE590521.1|EE590521
genomic: TATTAGTCCCTGGCGCAAAAAAGACTATAAGTTATTACTTCCTGAAAGAGgtaaactgtc ... ctttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCAT
EST: TATTAGTCCCTGGCGCAAAAAAGACTATAAGTTATTACTTCGTGAAAGAG TTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCAT
genomic: TATTAGTCCCTGGCGCAAAAAAGACTATAAGTTATTACTTCCTGAAAGAGgtaaactgtc ... ctttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCAT
ctattatttgcactagggattccaagtggtaatctaacattataactttttgcagTTTGAGAGGTGGTTAGGTTTTGATCAAAATCCTCTTTATGCTCTCTTGCATGAGTCTATCTATTGTCAG
ttataac putative branch site (score: 23)
ctttttgc CT-rich tract
taatctaacattataa TA-rich tract