1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...cctctgtttggtctggatgcttagctggctaattttgttggctggcctgctttatgaagtcccatttgttttccttacaatttacttggtaccattgcagTTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTGCTCCTGTTCAGCCTCATGTTAATTCGATATCTTGTGGTCCACCTGGTTG
species | Oryza sativa |
transcript | LOC_Os05g12170.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACG TTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTGEST: gi|29664499|gb|CB660774.1|CB660774
genomic: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACGgtattcgtcc ... accattgcagTTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTG
EST: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACG TTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTGEST: gi|29671009|gb|CB667284.1|CB667284
genomic: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACGgtattcgtcc ... accattgcagTTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTG
EST: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACG TTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTG
genomic: TATGAAGTACCCAGTACCACAGCAGGTTCCGTTGACCCCAACACAGAACGgtattcgtcc ... accattgcagTTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTG
cctgctttatgaagtcccatttgttttccttacaatttacttggtaccattgcagTTAACAATTTGCCTATGGGATATCCAGTACTCCAACAACCTGGAATACCTGCTCCTGTTCAGCCTCATGTTAATTCGATATCTTGTGGTCCACCTGGTTG
tccttac putative branch site (score: 2)
ttacaattta TA-rich tract