Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acatttaaacaccattttcaaattttttatctgtattccgatgccttgtgcatgatcctcaagcgacttctgtttactaaattggaccatacatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA

Basic information

species Oryza sativa
transcript LOC_Os04g57400.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os04g57400.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G464137_T02 (Zea mays), 3'ss of exon 5
acatttaaacaccattttcaaattttttatctgtattccgatgccttgtgcatgatcctcaagcgacttctgtttactaaa--ttggaccatacatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA
 ||||| |||||||   |||||   | |   |   |    ||   ||||   ||     ||   || |  ||||| | |||  ||||  | |    | | |||||||| || ||||| ||||| || |||||| | ||||| ||  |||||||||||||||||||   ||| |||||   |||||| || ||||| ||| | 
-cattttaacaccaacctcaaacactatgcatccctctatatattttgt-tttgtgttccacctgaatgttgttttccaaaacttggctcttctgcacgcagGAGAATAGTCGGAATCGCTCACGTAGAGGATCTCGAGTCAATCAAGGATGCCAGCAAGAGAGCAGAGTGCGAGCGTGCTGCCCTCAACTGTGCGAAGACG

upper sequence: LOC_Os04g57400.1 (Oryza sativa), 3'ss of exon 5
lower sequence: Vv03s0091g00100.t01 (Vitis vinifera), 3'ss of exon 5
--acatttaaacaccattttcaaattttttatct-gtattccgatgccttgtgcatgatcctcaagcgacttctgtttactaaattggaccat-acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA
    || |||     ||  | |||   | | ||| | ||||   || | |   | | ||   |||   | || | || |      |  | | |   ||    ||||||||||||||  | || ||||||||||||||||| || ||||  ||||| |||||| |||||   |||||| |||  || |||   | |||||||   
atttatgtaagtggtatcatgaaaccctgtttcttgcattct--tgtcatagacttcata--caattaattttttttaagacttctctatctttggattcacagGAGAATTGTTGGTGTAGCACATGTTGAGGATTTTGAATCAATTGTTGATGCTAGCAAGCGAGCTAACTGTGAGAGACAGGCACTTGTATTTGCAAAGATG

upper sequence: LOC_Os04g57400.1 (Oryza sativa), 3'ss of exon 5
lower sequence: Vv03s0091g00080.t01 (Vitis vinifera), 3'ss of exon 5
----acatttaaacaccattttcaaattttttatctgtattccgatgccttgtgcatgatcctcaagcgacttctgtttactaa--attggaccatacatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA
      || |||     ||  | ||    | | | |  ||||   || | |   | | || |   |   |  ||| ||||  |   || |  |  |  ||    ||||||||||||||  | || ||||||||||||||||| || ||||  ||||| |||||| |||||   |||||| |||  || |||   | |||||||   
cgatttatataagtggtatcatgaagccctgtgt-tacattct--tgtcatagacttcatac---aattatctctttttaagacttatcgatcttttgattcacagGAGAATTGTTGGTGTAGCACATGTTGAGGATTTTGAATCAATTGTTGATGCTAGCAAGCGAGCTAACTGTGAGAGACAGGCACTTGTATTTGCAAAGATG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|87004427|gb|CI298959.1|CI298959
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|8858194|gb|AU095512.1|AU095512
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|3767720|gb|AU031747.1|AU031747
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88833329|gb|CI076811.1|CI076811
EST:     TTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: TTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|87024716|gb|CI259431.1|CI259431
EST:     CAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: CAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|66915549|gb|CX102397.1|CX102397
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88272473|gb|CI386328.1|CI386328
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|58680093|gb|CK068780.1|CK068780
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88539565|gb|CI469527.1|CI469527
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88550979|gb|CI480468.1|CI480468
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88577726|gb|CI674328.1|CI674328
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|218504013|gb|FG946243.1|FG946243
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29674887|gb|CB671162.1|CB671162
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29657873|gb|CB654148.1|CB654148
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29618688|gb|CB623700.1|CB623700
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88242953|gb|CI244075.1|CI244075
EST:     AGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: AGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|86259804|gb|CI065677.1|CI065677
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTGTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|8859788|gb|AU097106.1|AU097106
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88903278|gb|CI088816.1|CI088816
EST:     TATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: TATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|86255547|gb|CI065224.1|CI065224
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29615261|gb|CB620273.1|CB620273
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88992772|gb|CI035734.1|CI035734
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88903496|gb|CI089034.1|CI089034
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|88250533|gb|CI348763.1|CI348763
EST:     TATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAGTTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: TATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|86497451|gb|CI140084.1|CI140084
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29662561|gb|CB658836.1|CB658836
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29641347|gb|CB646354.1|CB646354
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|29626239|gb|CB631250.1|CB631250
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|89169530|gb|CI109889.1|CI109889
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTTGAGGATTTTGAGTCGATTGAGGATG
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATG-TTGAGGATTTTGAGTCGATTGAGGATG
EST: gi|88529770|gb|CI458116.1|CI458116
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|109712724|gb|CI105332.1|CI105332
EST:     TTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: TTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|86541772|gb|CI181978.1|CI181978
EST:     TTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: TTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
EST: gi|86419464|gb|CI054265.1|CI054265
EST:     ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAG                         GAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC
genomic: ACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 47 (upstream exon), 63 (downstream exon)
Score: 4

CTATATACAACAGCTCAGAGCTTTTGTGCCTTGCACAGAAGAAGTACATGACAAGCCTATTTCATGACAGTCTTGGATTTGGTTCAGCAAAAATGATCAGgtaaataaat ... acatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgtgcatgatcctcaagcgacttctgtttactaaattggaccatacatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA
                             tactaaa  putative branch site (score: 4)
                           tttactaaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
acatttaaacaccattttcaaattttttatctgtattccgatgccttgtgcatgatcctcaagcgacttctgtttactaaattggaccatacatatgtagGAGAATTGTTGGAATTGCTCATGTTGAGGATTTTGAGTCGATTGAGGATGCCAGCAAGAGAGCTTCGTGTGAGCGACGTGCCCTTAATTGTGCAAAGGCA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAAG
- - - -aacacca
- - - - - - - - - - - - - - - - - - - cgatgcc
- - - - - - - - - - - - - - - - - - - - - - - - tgcatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggacca