1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtttgattgatttgtttttaccattagaggtcactgttgtaatatgtttaatgacattattttattacagGCTAAAGGCTTGAAAGTTACTTGTGTACTATGCTACTGCTCAGAAGGGGACAATATGCCAGAATCTTTCCAGTTGGCTGAGGCAGCATGCAAACTTGTTG
species | Oryza sativa |
transcript | LOC_Os03g55784.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATGATTACTACTCGAGCTTGCCATTTGCAGCACTATTCTCTGCCTGCAAG GCTAAAGGCTTGAAAGTTACTTGTGTACTATGCTACTGCTCAGAAGGGGAC
genomic: ATGATTACTACTCGAGCTTGCCATTTGCAGCACTATTCTCTGCCTGCAAGgtttgattga ... tttattacagGCTAAAGGCTTGAAAGTTACTTGTGTACTATGCTACTGCTCAGAAGGGGAC
ttttaccattagaggtcactgttgtaatatgtttaatgacattattttattacagGCTAAAGGCTTGAAAGTTACTTGTGTACTATGCTACTGCTCAGAAGGGGACAATATGCCAGAATCTTTCCAGTTGGCTGAGGCAGCATGCAAACTTGTTG
gtttaat putative branch site (score: 12)
ttatttt putative PPT
ttgtaatatgtttaat TA-rich tract