1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gttatacagaagttgcctcgatattaagttctgaaggatccacaaaaagagtacttccttatcactgtttcatggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACATTAGCAGCAGAGACAG
species | Oryza sativa |
transcript | LOC_Os03g13540.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|9865081|gb|AU100831.1|AU100831
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGACCTTCTGCANCTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|86507744|gb|CI150377.1|CI150377
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: TCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|88962486|gb|CI097638.1|CI097638
genomic: TCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|109711830|gb|CI029000.1|CI029000
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89161610|gb|CI100770.1|CI100770
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: AAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|88221310|gb|CI221266.1|CI221266
genomic: AAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|86510427|gb|CI153060.1|CI153060
genomic: ACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|27576775|gb|CA999469.1|CA999469
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89183251|gb|CI045816.1|CI045816
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89168999|gb|CI020539.1|CI020539
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|86481343|gb|CI123976.1|CI123976
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89165522|gb|CI102612.1|CI102612
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: AAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89165032|gb|CI102120.1|CI102120
genomic: AAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|8527438|gb|AU092253.1|AU092253
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|87026542|gb|CI252496.1|CI252496
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATAGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|88984674|gb|CI009447.1|CI009447
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|117234872|gb|CT847928.1|CT847928
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|27577370|gb|CB000065.1|CB000065
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89164491|gb|CI101579.1|CI101579
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: CCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|3766780|gb|AU030890.1|AU030890
genomic: CCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: CCCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|33660753|gb|CF291720.1|CF291720
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|15850183|gb|BI798459.1|BI798459
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: CCAT-GTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAEST: gi|58592688|gb|CF990996.1|CF990996
genomic: CCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTC-AATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACA
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|58691567|gb|CK080254.1|CK080254
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACEST: gi|89165743|gb|CI102833.1|CI102833
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
EST: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAG GTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
genomic: ACCATGGTGACACCAAGGAGCTTCTGCAACTTCTACTTCCAGTTCTGAAGgttatacaga ... ggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACAC
ttctgaaggatccacaaaaagagtacttccttatcactgtttcatggaatttcagGTCAATGGCATCGACTTCTACATCAATGGGCACGACCACTGCCTGGAACACATTAGCAGCAGAGACAG
acaaaaa TA-rich tract