1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tttttaaataatggaacaaaagttctgcctgctgcatctatcgatggacaaaaccatcgtaaattatcgcatcttctctcatagttcttgaaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACAGCATGGGTGTTTGCAAGGTGGGCAAGGCGCCCTGGTCCTCTCCTACAC
species | Oryza sativa |
transcript | LOC_Os02g29150.2 |
intron # | 5 |
splice site | 3' |
intron type | U12 (go to U12 genes for details) |
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACEST: gi|88903581|gb|CI089119.1|CI089119
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACEST: gi|88419997|gb|CI516446.1|CI516446
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACEST: gi|88955433|gb|CI091525.1|CI091525
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACEST: gi|86497040|gb|CI139673.1|CI139673
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACEST: gi|8857531|gb|AU094849.1|AU094849
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
EST: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACG GGAAGCTNTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
genomic: GATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGgtatcctttc ... aaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAAC
ggacaaaaccatcgtaaattatcgcatcttctctcatagttcttgaaacatgcagGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACAGCATGGGTGTTTGCAAGGTGGGCAAGGCGCCCTGGTCCTCTCCTACAC
gttcttgaa putative branch site
taaattat TA-rich tract