1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacgattttcttcggcatggggttataaattgttttgaatgctctaaagaataatttgggatgaattgtttccagGTTCAGGCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTTGGCGGCAACTGTTCTCAG
species | Oryza sativa |
transcript | LOC_Os02g13300.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TAGGGCAGACAATAACATATCCCCTTGATGTTGTTAGGCGGCAAATGCAG GTTCAGGCCTTTTCATCATCCAACCTTAGAAAAGGGAAAAGGAACATTTEST: gi|58589818|gb|CF988126.1|CF988126
genomic: TAGGGCAGACAATAACATATCCCCTTGATGTTGTTAGGCGGCAAATGCAGgtacgatttt ... ttgtttccagGTTCAGGCCTTTTCATCATCCAACCT-AGAAAAGGGAAAAGGAACATTT
EST: TAGGGCAGACAATAACATATCCCCTTGATGTTGTTAGGCGGCGAGGGCAG GTTCAGGCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGA
genomic: TAGGGCAGACAATAACATATCCCCTTGATGTTGTTAGGCGGCAAATGCAGgtacgatttt ... ttgtttccagGTTCAGGCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGA
ggttataaattgttttgaatgctctaaagaataatttgggatgaattgtttccagGTTCAGGCCTTTTCATCATCCAACCTAGAAAAGGGAAAAGGAACATTTGGAAGCATTGCTATGATAGCAAAACATCAAGGTTGGCGGCAACTGTTCTCAG
ctctaaa putative branch site (score: 9)
ttgtttcc putative PPT
taaattgttttgaat TA-rich tract