1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttagttcagttggtaccttactagctaggactattattattatagtaggagtaattatttgttcaatttcgcaattgcaccacaaaattactcatgtaaacatttccttttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGCGCCTTGAGAAATTCGTCACAG
species | Oryza sativa |
transcript | LOC_Os02g01150.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|58691582|gb|CK080269.1|CK080269
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACEST: gi|29674134|gb|CB670409.1|CB670409
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTC-AAGATGAACTTGATCTACTACGACCTGTATCAGTCCAC
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29680605|gb|CB676880.1|CB676880
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|58693460|gb|CK082147.1|CK082147
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29616322|gb|CB621334.1|CB621334
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|10794734|gb|AU108700.1|AU108700
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29682953|gb|CB679228.1|CB679228
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCCGAGCTGGTCTAATCGGCTCATCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29682997|gb|CB679272.1|CB679272
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29655664|gb|CB651939.1|CB651939
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|117233241|gb|CT848054.1|CT848054
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|11442863|gb|BF430762.1|BF430762
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: GGGAGTCATCGGAGCTGGTCGACATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29621567|gb|CB626578.1|CB626578
genomic: GGGAGTCATCGGAGCTGGTCGA-ATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|58606736|gb|CK034769.1|CK034769
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGEST: gi|29660668|gb|CB656943.1|CB656943
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29678225|gb|CB674500.1|CB674500
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|38481826|gb|CF965897.1|CF965897
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: AGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29613448|gb|CB618461.1|CB618461
genomic: AGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGEST: gi|29676108|gb|CB672383.1|CB672383
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
EST: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATG ATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
genomic: TGGGAGTCATCGGAGCTGGTCGAATCGGCTCAGCTTACGCAAGAATGATGgttagttcag ... tttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACG
caatttcgcaattgcaccacaaaattactcatgtaaacatttccttttaccacagATCGAGGGCTTCAAGATGAACTTGATCTACTACGACCTGTATCAGTCCACGCGCCTTGAGAAATTCGTCACAG
catttccttttacc CT-rich tract
acaaaatta TA-rich tract