1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatggtctgaatatttgtttgtttgcttgatggtttcttgtgaaagaattatccatgtgtagattctcaactttgacatggctattttaccatgtttcacacctacattttacattgccaacagggcatgtgataagttttttcccatttacctataatactgacatacggtttcgtaaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGACAACCGGTGGTGCTAGCAATAGTGAGCTCTAAGGTCGTCTTTGATGTTC
species | Oryza sativa |
transcript | LOC_Os01g68710.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55436956|gb|CV731667.1|CV731667
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|699803|gb|D46094.1|D46094
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|3762510|gb|AU029262.1|AU029262
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55440369|gb|CV733494.1|CV733494
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACAEST: gi|55409944|gb|CV722320.1|CV722320
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACA
EST: CCTGCAAAGATGGGTTATGGNGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88295466|gb|CI527829.1|CI527829
genomic: CCTGCAAAGATGGGTTATGG-GGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55438455|gb|CV732524.1|CV732524
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCCCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55413110|gb|CV725486.1|CV725486
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTAGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88420519|gb|CI562153.1|CI562153
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88276548|gb|CI397350.1|CI397350
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|33659573|gb|CF282186.1|CF282186
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: GCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|8527930|gb|AU092745.1|AU092745
genomic: GCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGANAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|86824178|gb|CI260793.1|CI260793
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTGATCGCCGTCAATGGAAAGAEST: gi|86829242|gb|CI284927.1|CI284927
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55436954|gb|CV731666.1|CV731666
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|11171677|gb|AU163906.1|AU163906
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|29679614|gb|CB675889.1|CB675889
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55433322|gb|CV729734.1|CV729734
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55413431|gb|CV725807.1|CV725807
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55433324|gb|CV729735.1|CV729735
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55414253|gb|CV726629.1|CV726629
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|9055415|gb|AU097613.1|AU097613
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88460304|gb|CI529379.1|CI529379
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|86829393|gb|CI285036.1|CI285036
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTT--CGCCGTCAATGGAAAGAEST: gi|27547036|gb|CA765286.2|CA765286
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|55441436|gb|CV734038.1|CV734038
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88207641|gb|CI207490.1|CI207490
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|15008509|gb|AU222897.1|AU222897
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCNCCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|33685240|gb|CF313479.1|CF313479
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: CCTGCAAAGATGGGTTATGGGGAGGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATTTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|51946051|gb|CV152392.1|CV152392
genomic: CCTGCAAAGATGGGTTATGGGGAG-AGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|163928575|gb|EG711160.1|EG711160
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGAEST: gi|88242499|gb|CI242348.1|CI242348
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
EST: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAG GTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
genomic: ACCTGCAAAGATGGGTTATGGGGAGAGAGGCTCCCCACCGAAGATTCCAGgtatggtctg ... taaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGA
gataagttttttcccatttacctataatactgacatacggtttcgtaaccaatagGTGGAGCAACACTAATCTTTGACACGGAGCTTATCGCCGTCAATGGAAAGACAACCGGTGGTGCTAGCAATAGTGAGCTCTAAGGTCGTCTTTGATGTTC
atttacctataata TA-rich tract