1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttgctttcttggcatatcggattcatttggtttggtcagctatcacccaactacttcaatttatgtttgtaacatttttttctctttttctattacagTTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATATGGTGCATGCTTTGAATCCATCTGATCACATG
species | Oryza sativa |
transcript | LOC_Os01g61030.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GAGGCAGGAAGTCTGAATGAGATAATGTCTTCCGATGTTGAGACACTAAG TTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATATEST: gi|58664473|gb|CK053159.1|CK053159
genomic: GAGGCAGGAAGTCTGAATGAGATAATGTCTTCCGATGTTGAGACACTAAGgttgctttct ... tctattacagTTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATAT
EST: GAGGCAGGAAGTCTGAATGAGATAATGTCTTCCGATGTTGAGACACTAAG TTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATAT
genomic: GAGGCAGGAAGTCTGAATGAGATAATGTCTTCCGATGTTGAGACACTAAGgttgctttct ... tctattacagTTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATAT
cacccaactacttcaatttatgtttgtaacatttttttctctttttctattacagTTTGGGTGACCTGAATAACATTCGAAATGTGACAGAACTACTATGTGATATGGTGCATGCTTTGAATCCATCTGATCACATG
ttgtaac putative branch site (score: 13)
catttttttctctttt CT-rich tract
ttcaatttatgtttgt TA-rich tract