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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaattcagagcagttatttatatgtcctcaaattttatcatttggctgtagaatatgaatttgttccacagGACGAAATGCATGGTATAA

Basic information

species Oryza sativa
transcript LOC_Os01g51970.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttatatgtcctcaaattttatcatttggctgtagaatatgaatttgttccacagGACGAAATGCATGGTATAA
                                           tttgttcc  CT-rich tract
           tcaaattttatcattt  TA-rich tract