Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcattgtccatcttgtcagccagtttatgaataaactactactactagtgcttaacctgctcatcgcagtgaccagtgagtgataatcgtttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAG

Basic information

species Oryza sativa
transcript LOC_Os01g34480.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g34480.1 (Oryza sativa), 3'ss of exon 5
lower sequence: GRMZM2G179981_T01 (Zea mays), 3'ss of exon 5
----tcattgtccatcttgtcagccagtttatgaataaactactactactagtgcttaacctgctcatcgcagtgaccagtgagtgataatcgtttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAG
     | | |||     |||  | |     |||||| || || ||||   | |  ||         |      | || |  |||| ||  || | ||    ||||||||||||||||||||| |  || |||  |||||| ||||||||||| |||||||||||| | ||| | ||  ||| ||| ||| | |||||| |||||
tgtcacttcgtcagcagtgtttgtcttagaatgaatgaaatattacttagaatagttcgtagaacgaataagataactaa-gagt-atgttcctcttg--gcagGTGTGCAGATGACAAGCCGTTTGTCCCACCCTACCAAGTATCAAAGGAGAAGATAAAAAGCATAGGCATCGAGTTGATTCCACTGGAGACGAGCGTCAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88264477|gb|CI368251.1|CI368251
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88994301|gb|CI117255.1|CI117255
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86431768|gb|CI085379.1|CI085379
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|44671842|gb|CR285276.1|CR285276
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAACATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGG
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGG
EST: gi|86537762|gb|CI177968.1|CI177968
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86259639|gb|CI065512.1|CI065512
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|3761487|gb|C98735.1|C98735
EST:     TCGTCCAAATCCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCNGGTATCAAAGGAAAA
genomic: TCGTCCAAAT-CATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|4715566|gb|AU056682.1|AU056682
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGNAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86604170|gb|CI114944.1|CI114944
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87009973|gb|CI277474.1|CI277474
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88218326|gb|CI218175.1|CI218175
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88594401|gb|CI714359.1|CI714359
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGGCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89192986|gb|CI050284.1|CI050284
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88662033|gb|CI462908.1|CI462908
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89181761|gb|CI113267.1|CI113267
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89176203|gb|CI043224.1|CI043224
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCNATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86593765|gb|CI266445.1|CI266445
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89195573|gb|CI393602.1|CI393602
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGAC-AGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88379119|gb|CI508637.1|CI508637
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86853770|gb|CI250021.1|CI250021
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86259620|gb|CI065493.1|CI065493
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86525898|gb|CI166104.1|CI166104
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCGGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88275106|gb|CI395710.1|CI395710
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86867347|gb|CI337829.1|CI337829
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86541080|gb|CI181286.1|CI181286
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88661831|gb|CI460231.1|CI460231
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88371947|gb|CI681462.1|CI681462
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86595141|gb|CI260380.1|CI260380
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86543631|gb|CI183837.1|CI183837
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86528726|gb|CI168932.1|CI168932
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCGGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88661067|gb|CI449876.1|CI449876
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88907332|gb|CI090126.1|CI090126
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGGCAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|33808886|gb|CF330328.1|CF330328
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88828470|gb|CI073340.1|CI073340
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86542734|gb|CI182940.1|CI182940
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86524286|gb|CI164492.1|CI164492
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88902651|gb|CI088189.1|CI088189
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|33658080|gb|CF280694.1|CF280694
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88274458|gb|CI394864.1|CI394864
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86595224|gb|CI262462.1|CI262462
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86541265|gb|CI181471.1|CI181471
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88206697|gb|CI206546.1|CI206546
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCGGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88662059|gb|CI463260.1|CI463260
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88247035|gb|CI246884.1|CI246884
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87031437|gb|CI261811.1|CI261811
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88844750|gb|CI021325.1|CI021325
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATGTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88275204|gb|CI395808.1|CI395808
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|13806320|gb|AU181468.1|AU181468
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88263280|gb|CI367054.1|CI367054
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|218497240|gb|FG957726.1|FG957726
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89188281|gb|CI115530.1|CI115530
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86855526|gb|CI267055.1|CI267055
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88673802|gb|CI727915.1|CI727915
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88828612|gb|CI073482.1|CI073482
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88222853|gb|CI220704.1|CI220704
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86255575|gb|CI065252.1|CI065252
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89179866|gb|CI044145.1|CI044145
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88594794|gb|CI714752.1|CI714752
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88840356|gb|CI079810.1|CI079810
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86528715|gb|CI168921.1|CI168921
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCGGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89181441|gb|CI112947.1|CI112947
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88243689|gb|CI242811.1|CI242811
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88218768|gb|CI218617.1|CI218617
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86424481|gb|CI063242.1|CI063242
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88846314|gb|CI373082.1|CI373082
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGG--AA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89174836|gb|CI111034.1|CI111034
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86510036|gb|CI152669.1|CI152669
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88833026|gb|CI369916.1|CI369916
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTCCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88267432|gb|CI379367.1|CI379367
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAACCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88200576|gb|CI200426.1|CI200426
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86536058|gb|CI176264.1|CI176264
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|8856175|gb|AU093493.1|AU093493
EST:     CTCGTCCAAATCATTCGTGNGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88661127|gb|CI450712.1|CI450712
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87024806|gb|CI261315.1|CI261315
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88246948|gb|CI246797.1|CI246797
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86824101|gb|CI260746.1|CI260746
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87020737|gb|CI267458.1|CI267458
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87019002|gb|CI256887.1|CI256887
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88833896|gb|CI077377.1|CI077377
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89163557|gb|CI100447.1|CI100447
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86538009|gb|CI178215.1|CI178215
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86427914|gb|CI073011.1|CI073011
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88661081|gb|CI450081.1|CI450081
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|11564616|gb|AU165252.1|AU165252
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86827020|gb|CI268873.1|CI268873
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87029301|gb|CI250234.1|CI250234
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88248464|gb|CI248313.1|CI248313
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86413294|gb|CI067699.1|CI067699
EST:     CTCGTCCCAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86593746|gb|CI266426.1|CI266426
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88831683|gb|CI369365.1|CI369365
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88908183|gb|CI090778.1|CI090778
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86484827|gb|CI127460.1|CI127460
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86855271|gb|CI265197.1|CI265197
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88205855|gb|CI205704.1|CI205704
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88958573|gb|CI096089.1|CI096089
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86538146|gb|CI178352.1|CI178352
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88418835|gb|CI506596.1|CI506596
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGCAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88253325|gb|CI351951.1|CI351951
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86412780|gb|CI067185.1|CI067185
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|89173370|gb|CI041263.1|CI041263
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|5002866|gb|AU067975.1|AU067975
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|87028684|gb|CI266083.1|CI266083
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86537196|gb|CI177402.1|CI177402
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86545360|gb|CI185566.1|CI185566
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCGGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86428683|gb|CI075364.1|CI075364
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATTTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86602007|gb|CI260477.1|CI260477
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88671711|gb|CI725742.1|CI725742
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86594228|gb|CI251100.1|CI251100
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86541276|gb|CI181482.1|CI181482
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|14713745|gb|AU197714.1|AU197714
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGNCAAGCCATCAGTGCCNATCTTCCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|12405060|gb|AU166661.1|AU166661
EST:     GTCCAAAATCATTNGTGAGAATGTATCCCAAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAAGGAAA
genomic: GTCC-AAATCATTCGTGAG-ATGTATCCC-AATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATC-AAAGGAAA
EST: gi|86602033|gb|CI260503.1|CI260503
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86602088|gb|CI260558.1|CI260558
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATCCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|86593825|gb|CI266505.1|CI266505
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88218615|gb|CI218464.1|CI218464
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA
EST: gi|88960868|gb|CI382549.1|CI382549
EST:     CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAA                         GTGTGCAGATGACAAGCCATCAGTTCCAATCTACCAGGTATCAAAGGAAAA
genomic: CTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 74 (upstream exon), 65 (downstream exon)
Score: 62

CAGCAAATGGAAGATATTGCATGGTTGAAAGAGTTGCGCACTACTCAGAGCTCGTCCAAATCATTCGTGAGATGTATCCCAATATTCCTCTGCCAGACAAgtaagtcact ... ttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagtgcttaacctgctcatcgcagtgaccagtgagtgataatcgtttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAG
    gcttaac  putative branch site (score: 62)
                                         tcgtttttct  putative PPT
                                            tttttcta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tcattgtccatcttgtcagccagtttatgaataaactactactactagtgcttaacctgctcatcgcagtgaccagtgagtgataatcgtttttctacagGTGTGCAGATGACAAGCCATCAGTGCCAATCTACCAGGTATCAAAGGAAAAGATAAAAAGCTTGGGCCTGGAACTGACTCCCCTGCACACGAGCATCAAG

- - -gtccatc
- - - - - - - - - - - - - - gaataaa
- - - - - - - - - - - - - - - - - - - - - - - - tgcttaa