1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtttggacaaagtttctttgtactctactgtagttagtagggaaagacagttccttaacatgatgtttattgggtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGGAAGTTCTCACTGATGCGTGCTGGGCTCTTTCATATTTATCTGATGGCA
species | Oryza sativa |
transcript | LOC_Os01g14950.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGTACAG ACTACGCCTGCTCTTCCAGCACTGGCACGGCTTATTEST: gi|88761467|gb|CI771023.1|CI771023
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATT
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCEST: gi|58608932|gb|CK036965.1|CK036965
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTC
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|218502437|gb|FG957283.1|FG957283
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCEST: gi|86851083|gb|CI311301.1|CI311301
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCC
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|218497818|gb|FG965121.1|FG965121
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|55411455|gb|CV723831.1|CV723831
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|2443054|gb|C74825.1|C74825
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|29662174|gb|CB658449.1|CB658449
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCAEST: gi|58588691|gb|CF986999.1|CF986999
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCA
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|29640361|gb|CB645370.1|CB645370
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|29643710|gb|CB648717.1|CB648717
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGEST: gi|66912883|gb|CX099731.1|CX099731
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
EST: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAG ACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
genomic: GGACTTTATCGAACTTCTGCAGAGGAAAACCACAGCCATCATTTGAACAGgtttggacaa ... gtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAG
tgtagttagtagggaaagacagttccttaacatgatgtttattgggtgtcaatagACTAGGCCTGCTCTTCCAGCACTGGCACGGCTTATTCACTCCAATGATGAGGAAGTTCTCACTGATGCGTGCTGGGCTCTTTCATATTTATCTGATGGCA
ccttaac putative branch site (score: 117)
atgtttatt TA-rich tract