1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgtgtctatagattcgattaattgtgttttaactaggaatgtacacttgcttaagaaaaccgctattgtcatccaacggaaacctaacacatgaaagatttgcagTGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGGGATTGGTATTGGCATATCTTCTGCTCTTGTGCCCCTTTACATATCTGAG
species | Oryza sativa |
transcript | LOC_Os01g04190.4 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CNGACGTTCATCCTGGATGCAATCCCTCTCGCTGTAAGTGCATTCCTGAG TGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGGEST: gi|66924477|gb|CX111325.1|CX111325
genomic: CGGACGTTCATCCTGGATGCAATCCCTCTCGCTGTAGGTGCATTCCTGAGgtgtgtctat ... agatttgcagTGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGG
EST: AATCCCTCTCGCTGTAGGTGCATTCCTGAG TGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGGEST: gi|300215629|gb|HO088255.1|HO088255
genomic: AATCCCTCTCGCTGTAGGTGCATTCCTGAGgtgtgtctat ... agatttgcagTGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGG
EST: CGGACGTTCATCCTGGATGCAATCCCTCTCGCTGTAGGTGCATTCCTGAG TGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGG
genomic: CGGACGTTCATCCTGGATGCAATCCCTCTCGCTGTAGGTGCATTCCTGAGgtgtgtctat ... agatttgcagTGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGG
ttaagaaaaccgctattgtcatccaacggaaacctaacacatgaaagatttgcagTGCAACAGCTCATGATGTTCGCACAATGATTATTGGCCGATTACTTGCTGGGATTGGTATTGGCATATCTTCTGCTCTTGTGCCCCTTTACATATCTGAG
acctaac putative branch site (score: 2)
aaagattt TA-rich tract