1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatggtcctaatcccttaaataatcgttccttttatctaatctttcctgtggccatgtacaaattaaggatgcactttcctgatgcttctagttttatttgctgaaaacagGGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGTTGATTATGATGATAACTATGATGGGATTGGGGATATACTCCCTGGCCAG
species | Oryza sativa |
transcript | LOC_Os11g43860.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTTCATGCATATGCGCAGGATAAGCGCTGGCCATATGTGTCAATCCCTTT GGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGT
genomic: CTTCATGCATATGCGCAGGATAAGCGCTGGCCATATGTGTCAATCCCTTTgtatggtcct ... ctgaaaacagGGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGT
gtacaaattaaggatgcactttcctgatgcttctagttttatttgctgaaaacagGGCAAGAGGTGAGAGACCTGAAGATTGGGTTCCGGCGGAAGATGCTTCAGTTGATTATGATGATAACTATGATGGGATTGGGGATATACTCCCTGGCCAG
tcctgat putative branch site (score: 8)
ttctagttttattt TA-rich tract