1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgagttaatataactgttactgatcttaactacaatttccactgggatcctagcttcttgttttcaccaaaaaattgtaacaatttcctttgcatttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGACCTGGCAGCCTCTTCTCCAGTGCACTTCACACATGTGCCCAGTGAAAATT
species | Oryza sativa |
transcript | LOC_Os10g35460.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAA GAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGACEST: gi|58668035|gb|CK056721.1|CK056721
genomic: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAAgtgagttaat ... catttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGAC
EST: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAA GAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGACEST: gi|33676386|gb|CF304625.1|CF304625
genomic: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAAgtgagttaat ... catttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGAC
EST: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAA GAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGACEST: gi|88960111|gb|CI381989.1|CI381989
genomic: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAAgtgagttaat ... catttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGAC
EST: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAA GAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAG
genomic: TGCTCTTGTGGCTGCCGAAATGAAAAATCTACTACAGGAAAATGTGTAAAgtgagttaat ... catttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAG
tcctagcttcttgttttcaccaaaaaattgtaacaatttcctttgcatttgacagGAAGAATGCACCTGATTTGCAATCCATCATTCACGGCCCTGGCAGATGGACCTGGCAGCCTCTTCTCCAGTGCACTTCACACATGTGCCCAGTGAAAATT
ttgtaac putative branch site (score: 4)
tttcctttgcattt putative PPT
aaaaaattgtaacaat TA-rich tract