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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT

Basic information

species Oryza sativa
transcript LOC_Os10g33720.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G107629_T03 (Zea mays), 3'ss of exon 5
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacat--atttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                            || | |  |   |  | |    |||  |  |   | ||| |   ||||      | | | | |||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
------------------------------------------gtaagccttttgtcttgactcctttgtaagtttccctgaaattcttttat-----ctgaccatctctactatttggcagATGCTAAATTTCAAAGATAACAATATAAACAATGAGGGGATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTCGGAGGATACCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G067764_T02 (Zea mays), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgata-catatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                            || | |  |  | |  ||   |  |  | |      || ||| ||| | | |  |||||   ||||| | |||||||||||||| ||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
------------------------------------------gtaagccttttgtcttgattcttttgtaagttgccctgaaattctttaatctaacccatct---ctactgtttggcagATGCTAAATTTCAAGGATAACAATATAAACAATGATGGGATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G433989_T01 (Zea mays), 3'ss of exon 1
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacat--atttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                            || | |  |   |  | |    |||  |  |   | ||| |   ||||      | | | | |||||||| || ||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||
------------------------------------------gtaagccttttgtcttgactcctttgtaagtttccctgaaattcttttat-----ctgaccatctctactatttgccagATGCTAAATTTCAAAGATAACAATATAAACAATGAGGGGATGCTTCATACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTCGGAGGATACCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G575696_T01 (Zea mays), 3'ss of exon 2
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                            || | |  |   |       | |     |||  || |    ||| || |   | | | | |||||||| || ||||| ||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||
------------------------------------------gtaagccttttgtcttgactcctttgtaagtttcccaga---aattcttttatctgaccatctctactatttgccagATTCTAAATTTCAAAGATAACAATATAAACAATGAGGGGATGCTTCGTATAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTCGGAGGATACCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA03G32130.2 (Glycine max), 3'ss of exon 3
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatga--tacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                  |  ||| ||| ||||  || |  |  |||| | |  | |  |  |||   ||| |  | ||  || || |  | | |  | | ||     | || | |  |||||||| || ||   | | |||||||| ||||||| |||||   |  |  | |||||||||||||| ||||| |||||||| ||||||||||| || ||||
----------------acacattttacccataaaatcatcaccaaaacttaagtttctcacctaa---ttgagagtattttaattttaacactatattccttcacaattgctcttt--cagATGCTTAATTTTCCAAACAACAATATAAACAATGGGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGAGGATACCTCCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA10G32470.1 (Glycine max), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
          ||  ||  || ||| ||  | |  |  || |   | | |   |   ||| || || |   ||||    |||  |||||||  | |  |||      |   || || |||||||| || ||   | | || ||| | ||||| || |||| | | || ||||| ||||||||||| ||||| ||||| |||||||||| ||||||||| |
---------gtcagtaccatgtttaac--agagctggttgtttgatatagtctgtttatctagattt---gcttggataaa--tcattatcttaa--cattccaatttgcat-tgccagATGCTTAACTTTTCAAACAATAATCTAAACAACGAAGGAAGGTTGCGGACAGTGCTTGATGTTGGCTGTGGTGTTGCAAGTTTTGGAGCATATCTTCTAT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA10G04370.1 (Glycine max), 3'ss of exon 3
gtaagtttgttctttagaatcttt-caccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
||||| | |||  |   |  |  |    || |||  |  |  |  |||||||| ||   | ||    | |      ||  || ||  |  ||   ||||||  ||  || |      |||||||| || ||   | | ||    ||||||||||| ||||  ||||| |  ||| |||||||||| ||||| ||||| || |||||||||||||||||||
gtaagctagttactcctatccggtatggcactaaaataatcaccaaaacatgaaactcttatatgactggaaaaagttataagtttgtagtttatattcatgattggtatt-----tcagATGCTCAACTTTCCAAACAATGTGATTAACAATGAAGGAAGACTTCGCAATGTTTTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATATCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA10G00880.2 (Glycine max), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
     |||           | |  ||    || ||| ||    ||  |  |||   |||||||||      ||||     |  ||||   | | |       ||| || |    | |||||||| || ||   | | |||||| |||| ||||| ||||  || || || |||||||||||||| ||||| ||||| |||||||||| |||||||||||
----attttcaagaccatgtttgacagtgttagttttttggtgcattcg-gat---tatttaaattc---actttc----atctcatggatctcacagtgagtttgtatt----gccagATGCTCAATTTTTCAAACAACAATCTTAATAATGAAGGAAGACTGCGGACGGTTCTTGATGTTGGCTGTGGTGTTGCGAGTTTTGGAGCATATCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA20G35120.4 (Glycine max), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttca-aacttcattattgtgattcatcttttctactatc--tggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                    |||| |    |   |  || |   | | ||   |  ||| || || |     | |||||    |  || ||| |   | | | || |   |  |  || |||||||| || ||   | | || ||| | |||||||| |||| | | || ||||| ||||||||||||||||| ||||| |||||||||| ||||||||| |
-------------------acttttaatggtg-ctggttgtttgatatattccatttatctagatttgcttgtatttcatggataaatcattat--cttaacattccagtttgcattgccagATGCTTAACTTTTCAAACAATAATCTAAACAATGAAGGAAGGTTGCGGACAGTGCTTGATGTTGGTTGTGGTGTTGCAAGTTTTGGAGCATATCTTCTAT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA19G34890.1 (Glycine max), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
            |  |  |  ||| ||| ||||  || |  | |||||||   |  |  | |  |  | |    |     | || |  | | |  | |  |     | || | |  |||||||| || ||   | | ||  |||| ||||||| |||||   |  |  | |||||||||||||| ||||| |||||||| ||||||||||||||| |||
------------taaaacacattttacccataaaatcatcacccaaacatagaagtttctcacctaattgagagt-----attttaacactatattcctccacaattgctcttt--cagATGCTTAATTTTCCAAACAATGATATAAACAATGGGGGAAGAGTCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGAGGATATCTTATTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA13G18630.1 (Glycine max), 3'ss of exon 3
gtaagtttgtt-ctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
||||| | ||| ||      |  ||   || |||  |  |  |  |||||| | ||   | ||    | |      ||  ||||| ||| ||   ||||||  ||  || ||     |||||||| || ||   | | ||    || |||||||| ||||  ||||| |  ||| |||||||||| ||||| ||||| || |||||||||||||||||||
gtaagctagttactcctatctagtttggcactaaaataatcaccaaaacataaaactcttatatgactggaaaaagttgtaactttattgtttatattcatgattggtatta-----cagATGCTCAACTTTCCAAACAATGTCATAAACAATGAAGGAAGACTTCGCAATGTTTTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATATCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA02G00550.1 (Glycine max), 3'ss of exon 3
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
     | | |||   |  || ||| ||  |   ||  || |      |||  |   |||||||||         | ||| |   | | |  |||| |            | | | ||||||||| || ||   | |  | ||| | || ||||| ||||  || || || |||||||||||||| || || ||||| ||||||||||  ||||||||||
-----tcttttcaagaccatgtttgac--agtgttagttgtttggtgcattctgattatttaaattcactttcatctcatagacc-tcacagtgagtt-----------tgtattgcagATGCTCAATTTTTCACACCATAATCTCAATAATGAAGGAAGACTGCGGACGGTTCTTGATGTTGGCTGCGGTGTTGCGAGTTTTGGAGCTTATCTTCTTT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: AT3G23300.1 (Arabidopsis thaliana), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgata-catattta-aatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                      ||   ||   |  | | | ||| |  |||   ||  | | || | ||||||| |  |||| |   | |||    |  | ||||||||| || ||     | ||   | | ||||||| ||||| |||  | ||| ||||||||||||| ||||| |||||||| |||||||| ||||||||| 
-------------------------------------gtaaggcagttactagatcttatgtggaatagaggtgtgtgtccatcttcatt-tactgatac---tattcatggaaattgcagATGCTTAATTTTCCGAACAATGTTTTGAACAATGGGGGAAGGCTGAGGACATTTCTTGATGTTGGCTGTGGTGTTGCTAGCTTTGGAGGTTATCTTCTTG

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: AT4G14360.1 (Arabidopsis thaliana), 3'ss of exon 4
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattatt-gtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                                      ||    |   |   |   | |||  |     |    | |   | |   | ||| |  | |  | || |     || |  |||||||| || |      | |||    | ||||| |  |||| |||  | || ||| | |||||||||||||| ||||| ||||||||||| |||||| | |
-------------------------------------gtaaggaagttacacttggtgtttgtacaagagaacgtatattattctttcatttgctaattgtattcttggaaatttttcagATGCTTAACTATCCTAACAACGTGCTGAACAACGGTGGAAGGCTAAGGACGGTTTTCGATGTTGGTTGTGGTGTTGCGAGTTTTGGAGGTTATCTTTTAT

upper sequence: LOC_Os10g33720.1 (Oryza sativa), 3'ss of exon 4
lower sequence: Vv07s0005g03630.t01 (Vitis vinifera), 3'ss of exon 3
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaaca-tgatacatatttaaatgttgggctttt-tcaaacttcattattgtgattcatcttttctactat---ctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
||||||| |||||||| ||| |   |     ||      |   | || | |  || |||  | ||| ||| |||| | |    ||  || | ||    |||| |||  |    |   |||||||||||| || ||   | |||| ||| | |||||||  |||| | | || ||||| |||||||| ||||||||||| || ||||| |||| |||||||||||
gtaagttggttctttacaatgtccaaaagggaaaaatggaaagccaagacttgtaaatacattaatcttgtgcttgtgttctgctgaataagtgatgatcatttttaatggattggactggcagATGCTCAACTTTCCAAATAATAATTTAAACAATGGAGGAAGGATCCGCACAGTCCTTGATGTCGGTTGTGGAGTGGCAAGTTTCGGAGCATATCTTCTTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33675210|gb|CF303449.1|CF303449
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
EST: gi|27554159|gb|CA998059.1|CA998059
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATA
EST: gi|66924383|gb|CX111231.1|CX111231
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
EST: gi|58604727|gb|CK015255.1|CK015255
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
EST: gi|44676356|gb|CR289790.1|CR289790
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTAC
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTAC
EST: gi|163926509|gb|EG712373.1|EG712373
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
EST: gi|33676827|gb|CF305066.1|CF305066
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
EST: gi|33676729|gb|CF304968.1|CF304968
EST:     GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAAT                         ATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA
genomic: GAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 48 (upstream exon), 72 (downstream exon)
Score: 17

CCAGAATTGGATGATTGATGCAGGTGAGAAAATCAAATTTCCAGGTGGTGGAACACATTTCCATCATGGAGCTGACAAATATATAGCAAACATAGCAAATgtaagtttgt ... tatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT
                               ttcatcttttctact  CT-rich tract
        tttttcaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagtttgttctttagaatctttcaccaataatttcttatcacaaacatgatacatatttaaatgttgggctttttcaaacttcattattgtgattcatcttttctactatctggcagATGCTAAAGTTCAAAGATAACAATATTAACAATGAGGGAATGCTTCGTACAGTTCTTGATGTTGGTTGTGGAGTTGCTAGTTTTGGAGGATATCTTCTTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT