1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgcataaatattagaagctttgattaactattttcccaagtgcatccttgcattaactctgtactatggaatttctgtaccatcttttgcttcacatatgtcttcttcacccttgatttacattgtttgcaagcatatgtgttgctattcgttaccaaagaagtcacgagaactggttaattttcagGTATGCTGCATTGGCACCTCTTTACTACCGGGGAGCTGGTGCCGCAATTGTTGTGTATGACATAACAAGTTCAGAATCATTTAACAAGGCACAATACTGG
species | Oryza sativa |
transcript | LOC_Os10g30520.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATTCCACACACAGTAAAGTTTGAAATATGGGATACTGCTGGTCAGGAGAG GTATGCTGCATTGGCACCTCTTTACTACCGGGGAGCTGGTGCCGCAATTGT
genomic: ATTCCACA-ACAGTAAAGTTTGAAATATGGGATACTGCTGGTCAGGAGAGgtgcataaat ... taattttcagGTATGCTGCATTGGCACCTCTTTACTACCGGGGAGCTGGTGCCGCAATTGT
gcatatgtgttgctattcgttaccaaagaagtcacgagaactggttaattttcagGTATGCTGCATTGGCACCTCTTTACTACCGGGGAGCTGGTGCCGCAATTGTTGTGTATGACATAACAAGTTCAGAATCATTTAACAAGGCACAATACTGG
ggttaat putative branch site (score: 5)
ttttc CT-rich tract
ttaattttca TA-rich tract