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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagaagtttaaccaattctccaagttattgaactgtacttgtactggggcatccttaactcaatttgtcaatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC

Basic information

species Oryza sativa
transcript LOC_Os10g28200.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os10g28200.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G124434_T01 (Zea mays), 3'ss of exon 4
gtagaagtttaaccaattctccaagttattgaactgtacttgtactggggcatc--cttaactcaa------tttgtcaatggat-agGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC
||  |  |   |||| || ||   | | | |   ||   |  ||      || |  | | |   ||      | | |   |  || ||||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||| ||||||||||
gtgaacctactaccagttttctgggctgtggctgtgaggtcataacaatccaacggcctgataaaaaaatgctctctttgtctatcagGTGGCCGCGAGAAGGCACCGGCTGCCTTCTGCAGAAAGGCTCAGACATCCACGGAGAGGTTTGAGATGTGGGGCGATGGTCTCCAGACCAGGTCCTTCAC

upper sequence: LOC_Os10g28200.1 (Oryza sativa), 3'ss of exon 4
lower sequence: AT5G28840.1 (Arabidopsis thaliana), 3'ss of exon 4
---gtagaagtttaaccaattctccaagttattgaactgtacttgtactggggcatccttaactcaatttgtc--aatgga--tagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC
   ||| |    ||| || ||  |  | ||  ||      | | ||  |     ||    |     |||||     ||  |  |||||||  | |||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| || || ||
gtagtatacagataaacagtttccgtactttgtgtgaatgattagttgtttactattgggattaatatttgcttggatcaacttagGTGGAAGGGAGAAGGCTCCAGCTGCTTTCTGTAGGAAGGCTCAGACTTCCACTGATAGGTTTGAGATGTGGGGAGATGGGCTTCAGACCCGTTCTTTTAC

upper sequence: LOC_Os10g28200.1 (Oryza sativa), 3'ss of exon 4
lower sequence: EFJ12864 (Selaginella moellendorffii), 3'ss of exon 3
gtagaagtttaaccaattctccaagttattgaactgtacttgta-ctggggcatccttaactcaatttgtcaatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC
         | | |  |     |||||  |    |   || ||| ||   | ||   | | |  ||     |      |||||| || |||||||| ||||| ||||| || ||||| ||||  ||||||||||| | |||||||||||||||||||||    || || || || || ||
--------gtgagcggtcta--aagtttgttctttactctcgtagctcatgtattggtga-ttgatgaaaaacaattcagGTGGACGGGAGAAGGCTCCAGCGGCATTTTGTAGGAAAGCTCTAACTTCCACTGATAAGTTTGAGATGTGGGGTGATGGGAAGCAAACACGATCATTTAC

upper sequence: LOC_Os10g28200.1 (Oryza sativa), 3'ss of exon 4
lower sequence: EFJ09286 (Selaginella moellendorffii), 3'ss of exon 3
gtagaagtttaaccaattctccaagttattgaactgtacttgta-ctggggcatccttaactcaatttgtcaatggat--agGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC
         | | |  |     |||||  |    |   || ||| ||   ||||   | | | |   ||  ||   ||  |||||| || |||||||| ||||| ||||| || ||||| ||||  ||||||||||| | |||||||||||||||||||||    || || || || || ||
--------gtgagcggtcta--aagtttgttctttactctcgtagctcatgcattggtgattga---tgaaaaccaattcagGTGGACGGGAGAAGGCTCCAGCGGCATTTTGTAGGAAAGCTCTAACTTCCACTGATAAGTTTGAGATGTGGGGTGATGGGAAGCAAACACGATCATTTAC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29642006|gb|CB647013.1|CB647013
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29663379|gb|CB659654.1|CB659654
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29663089|gb|CB659364.1|CB659364
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29639582|gb|CB644591.1|CB644591
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29662156|gb|CB658431.1|CB658431
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29612786|gb|CB617799.1|CB617799
EST:     CCGTGTTGGTCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29663824|gb|CB660099.1|CB660099
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29638323|gb|CB643332.1|CB643332
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29656907|gb|CB653182.1|CB653182
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|58691767|gb|CK080454.1|CK080454
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|58591287|gb|CF989595.1|CF989595
EST:     GTTGGCCGCTTCCACAACATATAT-GCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAG-A-GCAGCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: GTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29676976|gb|CB673251.1|CB673251
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAAGCACCAGCTGCATTCTGCAG
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAG
EST: gi|33801053|gb|CF326400.1|CF326400
EST:     GTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: GTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29668588|gb|CB664863.1|CB664863
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29656792|gb|CB653067.1|CB653067
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTG
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTG
EST: gi|29663088|gb|CB659363.1|CB659363
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCANGAAGGCTC
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTC
EST: gi|58590748|gb|CF989056.1|CF989056
EST:     GTGTTGGCCGCTTCCACAACATATATGGCCCCTTTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: GTGTTGGCCGCTTCCACAACATATATGGCCCC--TTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|2310372|gb|C26527.1|C26527
EST:     CGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGGAAAG                         GTGGCCGTNAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCC
genomic: CGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGG-AAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCC
EST: gi|29669312|gb|CB665587.1|CB665587
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|86830786|gb|CI293774.1|CI293774
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29662150|gb|CB658425.1|CB658425
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|117230143|gb|CT846231.1|CT846231
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29680859|gb|CB677134.1|CB677134
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAAGCACCAGCTGCATTCTG
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTG
EST: gi|29630035|gb|CB635044.1|CB635044
EST:     GTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: GTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29638695|gb|CB643704.1|CB643704
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29657346|gb|CB653621.1|CB653621
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|13420521|gb|AU174611.1|AU174611
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29688061|gb|CB684336.1|CB684336
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAAAAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|8858460|gb|AU095778.1|AU095778
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGANAAGGCACCAGCTGCATTCTGCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCA
EST: gi|29688060|gb|CB684335.1|CB684335
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAAAAAGGCTCAAACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29641880|gb|CB646887.1|CB646887
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|29672449|gb|CB668724.1|CB668724
EST:     CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCANGAAGGCTCAGACTTCCA
genomic: CCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
EST: gi|87016591|gb|CI275593.1|CI275593
EST:     AACATGGAAAG                         GTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA
genomic: AACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 71 (upstream exon), 73 (downstream exon)
Score: 38

GCAACTGAGGAGCTCTGCAAGCACTACACCAAGGACTTTGGCATTGAGTGCCGTGTTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGgtagaagttt ... caatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttattgaactgtacttgtactggggcatccttaactcaatttgtcaatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC
                             ccttaac  putative branch site (score: 38)
                                    tcaattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtagaagtttaaccaattctccaagttattgaactgtacttgtactggggcatccttaactcaatttgtcaatggatagGTGGCCGTGAGAAGGCACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGCCTCCAGACCCGGTCCTTCAC

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