1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gttaaatccttcctttgtcatttacttgtcattttagttttctctttattagcaaataataacagcaatgtgcttttccagGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAG
species | Oryza sativa |
transcript | LOC_Os09g39590.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAG GCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGAT
genomic: GATGGGGAGGATGTTGTTTATGCTGTTGACTTCAACCATCGTAAAGAGAGgttaaatcct ... gcttttccagGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGAT
tgtcattttagttttctctttattagcaaataataacagcaatgtgcttttccagGCATTTGAATGGTACTGCTCTTGGATCATTTGTACGGCCAGCTGTTCTGATAACTGATGCATACAATGCCTTGAACAACCATGTCTACAAAAGGCAGCAG
taataac putative branch site (score: 11)
tgcttttcc putative PPT
tttattagcaaataat TA-rich tract