1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtttgtgtcatttttctttctttgatccagtgtatcgctcccttcgtatgcttacctttgttagtacatttgtctttcagAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGTAAAGCTATATTAGCCCTACTAAGCGCCATCCATGTAAACA
species | Oryza sativa |
transcript | LOC_Os08g45240.4 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAG AATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGEST: gi|29670352|gb|CB666627.1|CB666627
genomic: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAGgtttgtgtca ... tgtctttcagAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAG
EST: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAG AATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGEST: gi|44677542|gb|CR290976.1|CR290976
genomic: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAGgtttgtgtca ... tgtctttcagAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAG
EST: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAG AATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAG
genomic: AAAGCAATTGGAAAGAGAGGACCGATGTTGATGCTCTAGAAAGACAGAAGgtttgtgtca ... tgtctttcagAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAG
tccagtgtatcgctcccttcgtatgcttacctttgttagtacatttgtctttcagAATCACATCCAGAAGAAACCTAAAATGCCCAAGAAAAGTATCCTTCACAAGTAAAGCTATATTAGCCCTACTAAGCGCCATCCATGTAAACA
tgcttac putative branch site (score: 33)
tttgtctttc putative PPT
tttgtta TA-rich tract