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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtattgtttatgtattcatgattatgttaacatgaatacatgatatcatgctgcaaatatatgttgttctcatgattatcttaacatgatatcggatgcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACTCGTGAACCTGGTCCTGTCAAGGGAGGATCCACTGTGATTGCCTTTGCAC

Basic information

species Oryza sativa
transcript LOC_Os08g09250.1
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|428745|gb|D24899.1|D24899
EST:     AGTACGACATTNGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGG
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGG
EST: gi|218502183|gb|FG956191.1|FG956191
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58601044|gb|CK011572.1|CK011572
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218501067|gb|FG950430.1|FG950430
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218480011|gb|FG946620.1|FG946620
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58686328|gb|CK075015.1|CK075015
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATT
EST: gi|88430523|gb|CI569546.1|CI569546
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAA-TACAGTTGTTG
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTG
EST: gi|32948215|gb|BP184787.1|BP184787
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58667761|gb|CK056447.1|CK056447
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58591648|gb|CF989956.1|CF989956
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|29640866|gb|CB645873.1|CB645873
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88351718|gb|CI617443.1|CI617443
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGGAAGA
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGA
EST: gi|325494388|gb|JG458912.1|JG458912
EST:     GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58688050|gb|CK076737.1|CK076737
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58685195|gb|CK073882.1|CK073882
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218497563|gb|FG948931.1|FG948931
EST:     ACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: ACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88412126|gb|CI566855.1|CI566855
EST:     -GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCA-CTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCA
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCA
EST: gi|218495099|gb|FG949613.1|FG949613
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58687296|gb|CK075983.1|CK075983
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|163917790|gb|EG712128.1|EG712128
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58682272|gb|CK070959.1|CK070959
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58591307|gb|CF989615.1|CF989615
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58598200|gb|CK008728.1|CK008728
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33657660|gb|CF280274.1|CF280274
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58591117|gb|CF989425.1|CF989425
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|38483262|gb|CF967064.1|CF967064
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218493123|gb|FG968720.1|FG968720
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|11442596|gb|BF430499.1|BF430499
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218495351|gb|FG943488.1|FG943488
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58596492|gb|CK007020.1|CK007020
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58691662|gb|CK080349.1|CK080349
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|4881143|gb|AU065442.1|AU065442
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGNGAAAATTAAATCCAGTTGTTGCTGCAAGATCCAC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATC-AC
EST: gi|38565838|gb|CK085291.1|CK085291
EST:     AGTACGAAATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58594310|gb|CF992618.1|CF992618
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58594873|gb|CF993181.1|CF993181
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33689145|gb|CF317384.1|CF317384
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAAT-AAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33676817|gb|CF305056.1|CF305056
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88311554|gb|CI572610.1|CI572610
EST:     GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACGTGAGGAG                         GTGTACAAATTGGGTGAGAAAATTAAATCCAGTTGTTG
genomic: GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAAC-TGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTG
EST: gi|58685397|gb|CK074084.1|CK074084
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58597234|gb|CK007762.1|CK007762
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|29680261|gb|CB676536.1|CB676536
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58586675|gb|CF984983.1|CF984983
EST:     GGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: GGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|7219920|gb|AU063009.2|AU063009
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58677692|gb|CK066379.1|CK066379
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33655732|gb|CF278346.1|CF278346
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTACAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|2797325|gb|AA750619.1|AA750619
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|163920585|gb|EG709592.1|EG709592
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218498878|gb|FG949810.1|FG949810
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88373322|gb|CI614658.1|CI614658
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGA
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGA
EST: gi|58591876|gb|CF990184.1|CF990184
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58599903|gb|CK010431.1|CK010431
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|11025939|gb|AU162540.1|AU162540
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33675751|gb|CF303990.1|CF303990
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218497481|gb|FG960433.1|FG960433
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATGGCAACTGAGGAC                         GTGTACAAATGGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|163921167|gb|EG710156.1|EG710156
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|33684591|gb|CF312830.1|CF312830
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAAT-AAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|38565594|gb|CK085047.1|CK085047
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218504775|gb|FG959637.1|FG959637
EST:     ACTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAACAAAATTAAATCCAGTGGTTGCTGCAAGATCAC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTG-AGAAAATTAAATCCAGTTGTTGCTGCAAGATCAC
EST: gi|88421279|gb|CI569124.1|CI569124
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCA-GATTT-T
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58676433|gb|CK065120.1|CK065120
EST:     AGTACGACATTGGAGCAGGATTCGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58678135|gb|CK066822.1|CK066822
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58684222|gb|CK072909.1|CK072909
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218497868|gb|FG968294.1|FG968294
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58678123|gb|CK066810.1|CK066810
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATNGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|117235897|gb|CT847849.1|CT847849
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58694985|gb|CK083672.1|CK083672
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58588379|gb|CF986687.1|CF986687
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58600984|gb|CK011512.1|CK011512
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88417065|gb|CI573780.1|CI573780
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCAC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCAC
EST: gi|58682483|gb|CK071170.1|CK071170
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218485093|gb|FG946930.1|FG946930
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|325493674|gb|JG458198.1|JG458198
EST:     GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: GTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58594415|gb|CF992723.1|CF992723
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|55828156|gb|AU065471.3|AU065471
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58678716|gb|CK067403.1|CK067403
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218483514|gb|FG958128.1|FG958128
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218485886|gb|FG950186.1|FG950186
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTAGCAAGATCAC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCT-GCAAGATCAC
EST: gi|33798425|gb|CF325070.1|CF325070
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58691986|gb|CK080673.1|CK080673
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88696013|gb|CI739588.1|CI739588
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAG
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAG
EST: gi|33794528|gb|CF323151.1|CF323151
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218493364|gb|FG968667.1|FG968667
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58585603|gb|CF983911.1|CF983911
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|55433119|gb|CV729591.1|CV729591
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|29688512|gb|CB684787.1|CB684787
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58683044|gb|CK071731.1|CK071731
EST:     AGTACGACATTGGAGCAGGATTCGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATGGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218504483|gb|FG959632.1|FG959632
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|38470686|gb|CF954817.1|CF954817
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58656585|gb|CK045265.1|CK045265
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58695737|gb|CK084424.1|CK084424
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58586439|gb|CF984747.1|CF984747
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|11233425|gb|AU164837.1|AU164837
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAA-TTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|9886121|gb|AU063011.2|AU063011
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|88407924|gb|CI588953.1|CI588953
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTA-AAATTGGCTGAGAAAATTAAATC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATC
EST: gi|58599370|gb|CK009898.1|CK009898
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|58679529|gb|CK068216.1|CK068216
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|4715714|gb|AU056830.1|AU056830
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
EST: gi|218504445|gb|FG949639.1|FG949639
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTTGCAAGATCAC
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCT-GCAAGATCAC
EST: gi|29683707|gb|CB679982.1|CB679982
EST:     AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC                         GTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT
genomic: AGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 65 (downstream exon)
Score: 710

ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGACgtatgtattg ... gcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACTCGTGAACCTGGTCCTGTCAAGGGAGGATCCACTGTGATTGCCTTTGCAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcaaatatatgttgttctcatgattatcttaacatgatatcggatgcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACTCGTGAACCTGGTCCTGTCAAGGGAGGATCCACTGTGATTGCCTTTGCAC
                          tcttaac  putative branch site (score: 710)
                      attatcttaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatgtattgtttatgtattcatgattatgttaacatgaatacatgatatcatgctgcaaatatatgttgttctcatgattatcttaacatgatatcggatgcaaatatagGTGTACAAATTGGCTGAGAAAATTAAATCCAGTTGTTGCTGCAAGATCACTCGTGAACCTGGTCCTGTCAAGGGAGGATCCACTGTGATTGCCTTTGCAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT