1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaatgttgttctccctaatctgcacctgctgtttaggttatagttattgtttttaattcttattatccatggaacctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAGATGACCGAAATCCCCAGTTGAGTGCACTGTATGAGGACACACCATTGC
species | Oryza sativa |
transcript | LOC_Os08g06140.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAG GGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAEST: gi|33380768|gb|CF196111.1|CF196111
genomic: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAGgtaatgttgt ... acctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
EST: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAG GGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAEST: gi|58680139|gb|CK068826.1|CK068826
genomic: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAGgtaatgttgt ... acctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
EST: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAG GGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAEST: gi|58667392|gb|CK056078.1|CK056078
genomic: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAGgtaatgttgt ... acctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
EST: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAG GGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAEST: gi|163921119|gb|EG710145.1|EG710145
genomic: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAGgtaatgttgt ... acctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
EST: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAG GGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
genomic: CGGACACTGGAATCATACCAACTGAGTTTGAGAACCATGGGGTGATGCAGgtaatgttgt ... acctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCA
ctgtttaggttatagttattgtttttaattcttattatccatggaacctttgcagGGTGAATTCATGGATGATCTGAGTGGGTTGGAAAATTTAGATTTCTGGCCAGATGACCGAAATCCCCAGTTGAGTGCACTGTATGAGGACACACCATTGC
ttttaat putative branch site (score: 1)
cctttgc putative PPT
ttatagttattgtttt TA-rich tract