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 5'  3'   		2  
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 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC

Basic information

species Oryza sativa
transcript LOC_Os07g49150.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G056569_T01 (Zea mays), 3'ss of exon 4
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtg-tgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGC-TCACTGGTCGC
 || || ||||     |     |||   | |        |       || || ||   |    |  | | ||  || || || | | || ||  | | |||||||| ||||| || |||||||| ||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||  |   | || |  | |  
-ttttagtgtgtgtattacccaatttgctttaactatgtctgagcatatagtactttatggttccatttgacattgctgatgttttgttttggatacccagGTGACCCATGCAGATTTCAAGAAAGCAAAGGAGAAGGTGATGTACAAGAAGAAGGAAGGTGTTCCGGATGGTCTCTACATGTAGTAGACGTCTCCTGCCT-

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G095593_T01 (Zea mays), 3'ss of exon 4
tttataatgtgc-tcgctcattgattatgtctggaagaaacaatttgcatggtcctcact---tccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
      || ||| | ||  |    |  |||||    | || |     | | |  || | |   | |  |   || | |  || |  ||||||  |    | |||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||         | |  ||  
---tccatttgcatagcataactgtcttgtctacttggaatatagcacttcgatctgattaggttctgagatttgctgatgt-ttttgttttgggtacacccagGTGACCCATGCAGATTTCAAGAAGGCAAAGGAGAAGGTGATGTACAAGAAGAAGGAAGGTGTTCCGGATGGTCTCTACATGTAGCCAATCTATTCATCAT

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G095593_T02 (Zea mays), 3'ss of exon 1
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC------------------------------------
                                 |   | || || |    |       |   | ||  || | |  || |  ||||||  |    | |||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||         | |  ||                                      
---------------------------------atatagcacttcgatctgattaggttctgagat--ttgctgatgt-ttttgttttgggtacacccaggtgacccatgcagatttcaagaaggcaaaggagaagGTGATGTACAAGAAGAAGGAAGGTGTTCCGGATGGTCTCTACATGTAGCCAATCTATTCATCATGCCGAACAAGTTACCCGATTGTGTGTGTACTAGCAC

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA03G32800.1 (Glycine max), 3'ss of exon 5
----tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGC--TCACTGGTCGC
    | |  ||| | |||  |  || ||| ||| | | |       ||||  ||||    ||   |     |  |   |  | |  | || | |   |   |||||||| ||||| ||||| |||||||||||||| || || ||||| |||||||| ||||| ||||| || || || || |||||| |     |||    |   
tttatattcaattttctctgtattttattttgttttgcaccttt--tttgagtggtgtgtaccctcgtgaccaaatgct--tttttttttatcttgctcttcagGTGACGCATGCCGACTTTAAGAAGGCAAAGGATAAAGTTATGTTTAAGAAGAAAGAAGGAGTGCCCGAAGGACTGTATATGTGAAGCATCTTCATCAATT--

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA19G35510.1 (Glycine max), 3'ss of exon 5
--tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGC--TCACTGGTCGC
   | ||  | |  | | |   |   | | | |||| |      | | | |   | | |||  ||    |  |   |  | |  |    | |   |   |||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||| || || || || |||||| |     |||    |   
aagtgatcctat-tttgttttctacctttttttggaggggtgtgtgt-cttttcctttactctcatgaccaaatgttttttttttaaaatcttgctcttcagGTGACGCATGCCGACTTCAAGAAGGCAAAGGATAAGGTTATGTTTAAGAAGAAAGAAGGGGTGCCAGAAGGACTGTATATGTGAAGCATCTTCATCATTT--

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: AT4G29040.1 (Arabidopsis thaliana), 3'ss of exon 5
tttataatgtgctcgctcattgattatgtctggaagaaaca-atttgcatggtcctc-------acttccacattcttaccgtggtgtgctgttttatgattt-cacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTG-GTCGC
  || |   |  |  |   ||  ||    |    | ||||| |    ||    || |       | | | |    || ||  |  |||| |    |  |||||   |||||||||||| |||| |||||||| |||||||||||||| |||||||||||||| ||||| || || || || || ||||||| |  |  | |     ||| 
-gtagagactcttaaccatttagttcaagcacatacaaacacacacacacacaccacttgggcaattactagccactgacgctaatgtgtttaaattggatttgttcagGTGACACATCCTGATTTCAAGAAAGCAAAGGAGAAGGTTATGTTCAAGAAGAAAGAAGGCGTCCCTGAAGGCCTCTACATGTAAAATTATAATCATATCG-

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: AT2G20140.1 (Arabidopsis thaliana), 3'ss of exon 5
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGAT--GTGCTCACTGGTCGC
    ||| |   || ||   |  | |   || ||   | | |   |||   |    |       | | | ||| | || || | || |||   ||   ||||||| ||||  |||||||||||||| ||||||||||| |||||||||||||| ||||| || || || |||||||||||||||    ||| ||  |     
---gtaagg-attctctggcttctcaccacttgattcatcgaac-gcaatctttgaataattttactttaacctttgtttggtcttctattggttt--agGTGACGCATGTGGACTTCAAGAAGGCGAAGGAGAAGGTTATGTTCAAGAAGAAAGAAGGAGTTCCTGAAGGTCTTTACATGTGAATGATGCACAACGACT--

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: Vv07s0005g05160.t01 (Vitis vinifera), 3'ss of exon 5
--tttataatgtgctcgctcattgattatgt-ctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
     |   ||    |  |   ||| ||  |  | |  ||    | |  | | |  |     |||  |||      |    ||    |  | || ||   |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||||        ||      
ggaagaagttgaatgcattacctgactacatgtttgctgattttagtcacctaggaccaggatcccaattaaatttgactggttaaatactgtgctt---cagGTGACTCATGTAGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAAGAAGGGGTGCCAGAAGGACTTTACATGTGAAAACACTGCTACATAT

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: EDP05705 (Chlamydomonas reinhardtii), 3'ss of exon 10
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacat-tcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC---------
             |    | || ||      ||  |          | ||  ||  || |  || | |||   |   | |  | |           | | |      || || ||||||   ||||| |||||||||||| | | |||||||||||| || |||||||||||  | ||||||| ||| |   |       |         
----------ctgcagcaactgcttgcacgagggcgcgcatgacgccgtgtgccgtacatggacttgtctcgactccgcgcccggcccatcttgcacgctgcctctgcagGCCGACTTCCGCAAGGCCAAGGAGAAGGTGCTCTACAAGAAGAAGGAGGGCGTGCCGGAGGGGTTGTACATGTAATGGGGGGATGCAAGACGACGACAGA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: PP1S109_234V6.1 (Physcomitrella patens), 3'ss of exon 4
-----------------------------------------------------------------------------tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgt-gctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
                                                                             ||||| || ||| |  |||  | ||  ||    ||       ||    |  ||  |||          |||    | | |   ||  |  || |    |||||||| || |  || ||||||||||| || ||||| |||||||  ||||||||||| || ||||| |||||| | |||||||   ||  ||| |    | 
gtgagactgttcgtattttgcatttcatgaatatgggcttcttgactagttgaaatcaggtgccagttatgcagtactttattat-tgcaccttcaaggttttagttgataatgtgattttgattttttcagcacggttgtgcaattaaatggatcttattggatgttggtcctgcagGTGACTCAAGTCGATTTCAAGAAGGCTAAAGAGAAAGTGATGTATAAGAAGAAGGAGGGCGTGCCTGAGGGTTTGTACATGTAGAGTATTCAGTACAGGT

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: PP1S12_207V6.1 (Physcomitrella patens), 3'ss of exon 4
-----------------------------tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcat--ggtcctcacttccacattcttaccgtggtgtgctgtttt--------atgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
                             ||  | |  ||   ||| |||||  |  |       | | || |||| |  | ||   |   |    |||||    ||   || | || |         |||| |  |||||||| || | ||| ||||||||||| || |||||||| ||||  ||||||||||||||||| || |||||  | |||||||    |  ||| ||   | 
gtaagattgtcgtcttttgtactttgcagttcgtga-atggaggctaattgaccagctgaaatgaataaaagttgcttttgatcaaaagacctggtttcttgtaatgagttgttattgttttggatggtgatcttgcagGTGACTCAAGTTGATTTCAAGAAGGCCAAAGAGAAGGTAATGTATAAGAAGAAGGAAGGTGTACCTGAGGGATTATACATGTAGATTATTCAGTGCAGGT

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: PP1S4_277V6.1 (Physcomitrella patens), 3'ss of exon 5
-----------------------------------------------------------------tttataatgtgctcgctcattgat-tatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACT-GGTCGC
                                                                 ||| | |  |||   ||||| | | |||   || | |     | |||  | ||  | | |     |  || |   | |  ||  | ||  | ||  |||||||||| || || |||||||||||||| ||||| || ||||||| |||||||||||||||||| || |||||  | || ||||    | |||| |     | 
gtgagcttgccatttctttgtattcttttatatgtatttttaatgcgtctcgtcagaggttacacttttttagttgcc--ctcatggctgtataattgcaggctttgaattggcttgttttgattctgtga--ctaagtattgactgtggattcttaatgccacagGTGACTCAAGCGGACTTCAAGAAGGCTAAGGACAAAGTGATGTACAAGAAGAAGGAAGGTGTACCCGAGGGGTTATATATGTAGAATACTCAGTCAAGTG-

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: EFJ20767 (Selaginella moellendorffii), 3'ss of exon 5
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
                                        | ||| |  | | ||   || ||||   ||   ||   |     |||| |  ||   ||||| || || ||||| ||||||||||| || |||||||| |||| ||||||||| ||||| || |||||||| || ||||||| |   ||   |    |  
--------------------------------------gtagttt-ctcgatgct---tttcacaactttcttgtaacg----attttcttcttctccagGTAACTCAAGCTGATTTCAAGAAGGCGAAAGAGAAGGTCATGTACAAGAAGAAAGAAGGCGTCCCGGAGGGCCTGTACATGTAAATAGCCGTCCCAGCTT

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 4
lower sequence: EFJ32659 (Selaginella moellendorffii), 3'ss of exon 5
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
                                        | ||| |    | ||   || ||||   ||   ||   |     |||| |  ||   ||||| || || ||||| ||||||||||| || |||||||| |||| ||||||||| ||||| || |||||||| || ||||||| |   ||   |    |  
--------------------------------------gtagttt-ctcaatgct---tttcacaactttcttgtaacg----attttcttcttctccagGTAACTCAAGCTGATTTCAAGAAGGCGAAAGAGAAGGTCATGTACAAGAAGAAAGAAGGCGTCCCGGAGGGCCTGTACATGTAAATAGCCATCCCAGCTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86431050|gb|CI083473.1|CI083473
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88962611|gb|CI097763.1|CI097763
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGA-GGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86429409|gb|CI076090.1|CI076090
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86503930|gb|CI146563.1|CI146563
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCCAAGAA
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTC-AAGAA
EST: gi|89195814|gb|CI007233.1|CI007233
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|87025727|gb|CI250221.1|CI250221
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88250012|gb|CI249861.1|CI249861
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88425068|gb|CI562383.1|CI562383
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88245879|gb|CI245728.1|CI245728
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|87027889|gb|CI276245.1|CI276245
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAA                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86433656|gb|CI093999.1|CI093999
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86484153|gb|CI126786.1|CI126786
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89179714|gb|CI043993.1|CI043993
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|29642572|gb|CB647579.1|CB647579
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|25803585|gb|CA759546.1|CA759546
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86493797|gb|CI136430.1|CI136430
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88955567|gb|CI091856.1|CI091856
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88459711|gb|CI521971.1|CI521971
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACNCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88961307|gb|CI096700.1|CI096700
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88453406|gb|CI563285.1|CI563285
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|58695039|gb|CK083726.1|CK083726
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88982979|gb|CI250583.1|CI250583
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86432606|gb|CI086217.1|CI086217
EST:     CAATAGGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88438920|gb|CI531100.1|CI531100
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88252767|gb|CI351195.1|CI351195
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86858871|gb|CI275097.1|CI275097
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88957448|gb|CI095389.1|CI095389
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86505772|gb|CI148405.1|CI148405
EST:     CCATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAA
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTC-AAGAAGGCAAAGGAGAAGGTGATGTTCAAGAA
EST: gi|3767639|gb|AU031666.1|AU031666
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACNCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88846141|gb|CI372909.1|CI372909
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86536640|gb|CI176846.1|CI176846
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88968825|gb|CI098932.1|CI098932
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88475412|gb|CI412683.1|CI412683
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88281675|gb|CI403071.1|CI403071
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86504999|gb|CI147632.1|CI147632
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|66915039|gb|CX101887.1|CX101887
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88226155|gb|CI226071.1|CI226071
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86420304|gb|CI056293.1|CI056293
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88197037|gb|CI196887.1|CI196887
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88199201|gb|CI199051.1|CI199051
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGTACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86489589|gb|CI132222.1|CI132222
EST:     CAATATGTACTGAAGCTGGAGTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88833660|gb|CI077141.1|CI077141
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89175692|gb|CI042713.1|CI042713
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89167668|gb|CI109069.1|CI109069
EST:     CTATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAGG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86433318|gb|CI093661.1|CI093661
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGA-GGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86498903|gb|CI141536.1|CI141536
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88449035|gb|CI560496.1|CI560496
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86489116|gb|CI131749.1|CI131749
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86483412|gb|CI126045.1|CI126045
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|38482146|gb|CF966203.1|CF966203
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86256042|gb|CI007758.1|CI007758
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86485805|gb|CI128438.1|CI128438
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89173378|gb|CI041271.1|CI041271
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88842097|gb|CI081353.1|CI081353
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89165967|gb|CI103057.1|CI103057
EST:     CGATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86483509|gb|CI126142.1|CI126142
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTTAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89181006|gb|CI045089.1|CI045089
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86493230|gb|CI135863.1|CI135863
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86414008|gb|CI068215.1|CI068215
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88248302|gb|CI248151.1|CI248151
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|29643332|gb|CB648339.1|CB648339
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89164890|gb|CI101978.1|CI101978
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|8956529|gb|BE230444.1|BE230444
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|58677646|gb|CK066333.1|CK066333
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86433435|gb|CI093778.1|CI093778
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88223363|gb|CI223212.1|CI223212
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86536125|gb|CI176331.1|CI176331
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88456489|gb|CI547205.1|CI547205
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88510314|gb|CI437820.1|CI437820
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88907671|gb|CI091069.1|CI091069
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88975234|gb|CI023485.1|CI023485
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAG--G-CAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88409573|gb|CI562059.1|CI562059
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86510362|gb|CI152995.1|CI152995
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86593331|gb|CI257971.1|CI257971
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86493066|gb|CI135699.1|CI135699
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88438221|gb|CI538580.1|CI538580
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATTTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89166652|gb|CI103938.1|CI103938
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGAAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86500635|gb|CI143268.1|CI143268
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88968624|gb|CI098840.1|CI098840
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86499128|gb|CI141761.1|CI141761
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88849096|gb|CI087618.1|CI087618
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|7168835|gb|AU066080.2|AU066080
EST:     TTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: TTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88222630|gb|CI222586.1|CI222586
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|58669958|gb|CK058644.1|CK058644
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88979178|gb|CI025680.1|CI025680
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|89195783|gb|CI007202.1|CI007202
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88489793|gb|CI427065.1|CI427065
EST:     AGAGAACGCCGAATNAAG                         GTNACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: AGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88228549|gb|CI228029.1|CI228029
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86494430|gb|CI137063.1|CI137063
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86488793|gb|CI131426.1|CI131426
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTTCAAGAA
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATG-TTCAAGAA
EST: gi|88955390|gb|CI091482.1|CI091482
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|9055428|gb|AU097626.1|AU097626
EST:     CTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88463739|gb|CI527066.1|CI527066
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|88227248|gb|CI228361.1|CI228361
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
EST: gi|86540338|gb|CI180544.1|CI180544
EST:     CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAG                         GTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG
genomic: CAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 68 (downstream exon)
Score: 49

GGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTACTGAAGCTGGACTTCTTGCTTTGAGAGAACGCCGAATGAAGgtatgagtga ... gatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC
                    ttcttac  putative branch site (score: 49)
                                       ttttatgattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tttataatgtgctcgctcattgattatgtctggaagaaacaatttgcatggtcctcacttccacattcttaccgtggtgtgctgttttatgatttcacagGTGACACATGCTGACTTCAAGAAGGCAAAGGAGAAGGTGATGTTCAAGAAGAAGGAAGGTGTGCCGGAGGGTCTTTACATGTGATGTGCTCACTGGTCGC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
- - -aatgtgc
- - - - - - - - - - - - - tgtctgg
- - - - - - - - - - - - - - - - - agaaaca
- - - - - - - - - - - - - - - - - - - - - - tgcatgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cattctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cgtggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgctgtt