1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tatctgattaatttgaactattatgatctgattcaataatagctaatatgaagattctaatatattctaacatgcactgtgattcttttttgttaaacagTTGCTATGGGCAGACTCTGACTGTGAGTACTTATATTGGTGAGACGCTGTATGCTATATTCTTGGCAGTTCTTGGTCTCGTCTTGTTTGCGCATTTGATT
species | Oryza sativa |
transcript | LOC_Os06g08850.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTCCTGAAGAAGTTCTTCTATTGCCTTTGGTGGGGTTTGCAGAATCTAAG TTGCTATGGGCAGACTCTGACTGTGAGTACTTATATTGGTGAGACGCTGTA
genomic: TTCCTGAAGAAGTTCTTCTATTGCCTTTGGTGGGGTTTGCAGAATCTAAGgtttgactct ... tgttaaacagTTGCTATGGGCAGACTCTGACTGTGAGTACTTATATTGGTGAGACGCTGTA
atatgaagattctaatatattctaacatgcactgtgattcttttttgttaaacagTTGCTATGGGCAGACTCTGACTGTGAGTACTTATATTGGTGAGACGCTGTATGCTATATTCTTGGCAGTTCTTGGTCTCGTCTTGTTTGCGCATTTGATT
ttctaac putative branch site (score: 1)
ttcttttttgtt putative PPT
attctaatatattcta TA-rich tract