1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttagttctgaaatgatcagttccatatcatttttgaacaaagcgaaatttgttcttatgataagcttgacattattttttgactgtttcagATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGATATTGTCGTCGGTGTGATCTTAGGCACTGGCTCAAACGCCGCATATCTTG
species | Oryza sativa |
transcript | LOC_Os05g09500.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTG ATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGATEST: gi|29672516|gb|CB668791.1|CB668791
genomic: GCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTGgttagttctg ... actgtttcagATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGAT
EST: TGCAGATGGCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTG ATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGATEST: gi|29672557|gb|CB668832.1|CB668832
genomic: TGCAGATGGCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTGgttagttctg ... actgtttcagATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGAT
EST: TGCAGATGGCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTG ATCAATGACACTGTTGGGACATTGGCGGCATGCAGCTACTACGACGAAGAT
genomic: TGCAGATGGCCATGGAGAAGCAAGGTCTGGACATGCGCGTTTCCGCATTGgttagttctg ... actgtttcagATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGAT
acaaagcgaaatttgttcttatgataagcttgacattattttttgactgtttcagATCAATGACACTGTTGGGACATTGGCGGCAGGCAGCTACTACGACGAAGATATTGTCGTCGGTGTGATCTTAGGCACTGGCTCAAACGCCGCATATCTTG
ttttgac putative branch site (score: 7)
ctgtttc CT-rich tract
ttgacattatttttt TA-rich tract