1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaaggaacttggtgcatatcttcttatgttttcactgaacatgtaaaattatttgttgagtttgtttgacatggtaatttatttgtttgttatgtagGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGTACACAAAGACTGGTATGTTGGGCTGAATACAGATCCCGTTGACCGCTCC
species | Oryza sativa |
transcript | LOC_Os03g61050.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAG GGTATCAGGGTATATGATGATGGACNAGCTAGAAGGACCTCGTAAGAAGGTEST: gi|5607636|gb|AU076308.1|AU076308
genomic: ACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAGgtaaggaact ... tgttatgtagGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGT
EST: ACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAG GGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGT
genomic: ACACGGGAAATAGTTTTGGCAACTTACAATGGTGTAGTGAATTTCTTCAGgtaaggaact ... tgttatgtagGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGT
gtaaaattatttgttgagtttgtttgacatggtaatttatttgtttgttatgtagGGTATCAGGTTATATGATGATGGACAAGCTAGAAGTACCTCGTAGGAAGGTACACAAAGACTGGTATGTTGGGCTGAATACAGATCCCGTTGACCGCTCC
gtttgac putative branch site (score: 28)
tttgttt putative PPT
taatttatttgtttgt TA-rich tract