1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gacaaataatggcttgggggaccatagttgatgtcttcctgcctgtaatcctcagttccacattgagcttagctgtttctgttttgccttttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCAGACTGTTCAGCGAGAACAAGCGCGAGTACAACCGCAAAGTCCGCGAGA
species | Oryza sativa |
transcript | LOC_Os03g57790.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|2313025|gb|C29180.1|C29180
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATNATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTNATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88384196|gb|CI548537.1|CI548537
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: TATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88289243|gb|CI553219.1|CI553219
genomic: TATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|33797775|gb|CF324747.1|CF324747
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38479547|gb|CF963650.1|CF963650
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|5038571|gb|AU070681.1|AU070681
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCNATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|2312219|gb|C28374.1|C28374
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGNTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86257938|gb|CI064291.1|CI064291
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|4716198|gb|AU057314.1|AU057314
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|313080727|gb|HO213524.1|HO213524
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88537072|gb|CI464883.1|CI464883
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: CAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86508354|gb|CI150987.1|CI150987
genomic: CAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAGGCAGCCEST: gi|4716098|gb|AU057214.1|AU057214
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88455962|gb|CI526778.1|CI526778
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86603007|gb|CI357371.1|CI357371
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATAGTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|11025772|gb|AU162373.1|AU162373
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|87030448|gb|CI252725.1|CI252725
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|27576870|gb|CA999564.1|CA999564
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGAEST: gi|38474625|gb|CF958758.1|CF958758
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGA
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88420443|gb|CI562077.1|CI562077
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: CTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58688873|gb|CK077560.1|CK077560
genomic: CTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|27576883|gb|CA999577.1|CA999577
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88505768|gb|CI433274.1|CI433274
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: CCTCTATCCAG TCCGTGCTCTGTGATCCAAACCCAAACTCCCCTCCAAACTCCGAAGCAGCCEST: gi|218500669|gb|FG957555.1|FG957555
genomic: CCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88284070|gb|CI405516.1|CI405516
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86827016|gb|CI268870.1|CI268870
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|27577979|gb|CB000674.1|CB000674
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGEST: gi|3761950|gb|C99198.1|C99198
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCG
EST: TCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCCGAAGCAGEST: gi|88376677|gb|CI537981.1|CI537981
genomic: TCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTAT-CCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACT-CCGAAGCAG
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86532121|gb|CI172327.1|CI172327
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|426691|gb|D22760.1|D22760
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGNTCTGTGATCCAAACCCAAACTCCCCTGCAAACTNCGA-GCAAGCEST: gi|7608686|gb|AU090468.1|AU090468
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCA-GC
EST: CCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAAACTCCNAAGCAGCEST: gi|88543885|gb|CI473932.1|CI473932
genomic: CCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGC-AAACTCCGAAGCAGC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88220568|gb|CI220128.1|CI220128
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|8251184|gb|AU091335.1|AU091335
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58594054|gb|CF992362.1|CF992362
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAGGGCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88323142|gb|CI550821.1|CI550821
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|33795388|gb|CF323564.1|CF323564
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|15008914|gb|AU223302.1|AU223302
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|13896438|gb|AU182774.1|AU182774
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58590675|gb|CF988983.1|CF988983
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38470097|gb|CF954228.1|CF954228
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATAATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86889534|gb|CI318725.1|CI318725
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88970549|gb|CI384051.1|CI384051
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAT TCCCTGCTCTTTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|55411803|gb|CV724179.1|CV724179
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58667929|gb|CK056615.1|CK056615
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86545526|gb|CI185732.1|CI185732
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCGATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58677295|gb|CK065982.1|CK065982
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88297174|gb|CI545264.1|CI545264
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38475004|gb|CF959137.1|CF959137
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATAATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38476828|gb|CF960961.1|CF960961
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38481351|gb|CF965440.1|CF965440
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88416265|gb|CI538421.1|CI538421
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|55409133|gb|CV721509.1|CV721509
genomic: ATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|2280796|gb|C25291.1|C25291
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58670025|gb|CK058711.1|CK058711
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|33655967|gb|CF278581.1|CF278581
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: TCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|3768193|gb|AU032220.1|AU032220
genomic: TCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86419732|gb|CI054533.1|CI054533
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|218485740|gb|FG958740.1|FG958740
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38482332|gb|CF966375.1|CF966375
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38480664|gb|CF964753.1|CF964753
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|87011706|gb|CI281408.1|CI281408
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|8336757|gb|BE041059.1|BE041059
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86489541|gb|CI132174.1|CI132174
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88464435|gb|CI544896.1|CI544896
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38469192|gb|CF953323.1|CF953323
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88547887|gb|CI478215.1|CI478215
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58675863|gb|CK064550.1|CK064550
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38468296|gb|CF952427.1|CF952427
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATAATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38469613|gb|CF953744.1|CF953744
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38468844|gb|CF952975.1|CF952975
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|117237213|gb|CT861798.1|CT861798
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88491073|gb|CI428345.1|CI428345
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38476763|gb|CF960896.1|CF960896
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|38481856|gb|CF965925.1|CF965925
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAAGCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|88442335|gb|CI541542.1|CI541542
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|218505167|gb|FG956727.1|FG956727
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|42592241|gb|CK738727.1|CK738727
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|86861737|gb|CI329520.1|CI329520
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|29666285|gb|CB662560.1|CB662560
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58602270|gb|CK012798.1|CK012798
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCEST: gi|58585769|gb|CF984077.1|CF984077
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
EST: ATCAATGGAGCCGTATATATGATGTTGCTGCGATATTGACCTCTATCCAG TCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
genomic: ATCAATGGAGCCCTATATATGATGTTGCTGCGATATTGACCTCTATCCAGgtatcatttg ... ttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCC
taatcctcagttccacattgagcttagctgtttctgttttgccttttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCAGACTGTTCAGCGAGAACAAGCGCGAGTACAACCGCAAAGTCCGCGAGA
tttctgttttgccttt CT-rich tract
ttttatct TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gacaaataatggcttgggggaccatagttgatgtcttcctgcctgtaatcctcagttccacattgagcttagctgtttctgttttgccttttatctgcagTCCCTGCTCTGTGATCCAAACCCAAACTCCCCTGCAAACTCCGAAGCAGCCAGACTGTTCAGCGAGAACAAGCGCGAGTACAACCGCAAAGTCCGCGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
-acaaata
- - - - -tggcttg
- - - - - - - - - - - - - gttgatg
- - - - - - - - - - - - - - - - - - tcctgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttagctg